| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3519 |
|---|
| Symbol | |
|---|
| ID | 6969320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3262435 |
|---|
| End bp | 3264141 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643387320 |
|---|
| Product | large subunit terminase |
|---|
| Protein accession | YP_002271783 |
|---|
| Protein GI | 209397398 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.918493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.00317443 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCC GGAAGAATGA ACCGCGATGT GATGAGCCGT CAGAAATGAC CGAGGCTGAA
CAACGTCTGT TCATCATGAC TAAACTGAGC AATCCCTGGT GGCGGCTCAA TCATCTCTAC
AAAATACAGA ACGAAAAAGG TGAACTGGTC ACCTTCAGAA TGCGACCGGC GCAGCGCCAG
TTGTTCCGGA GCATGCACAA TAAAAATATT ATCCTGAAAG CGCGCCAGCT GGGATTTTCC
ACAGCCATTG ATATTTATCT TCTCGACCAG GCATTATTCA TTCCGCATCT CAAATGCGGG
ATCGTCGCTC AGGATAAACA GGCTGCCAGT GAAATTTTCC GCACAAAAAT TGCTGTACCG
TTTGATCATC TCCCTGACTG GCTGAGAGCC TCATTCACCA TCGTTGAACG TCGTAGCGGT
GCCAGCGGTG GCTATATCCT GTTTGGTCAC GGCTCGAGTA TCCAGGTGGC AACCTCATTC
CGTTCAGGTA CGGTGCAGCG CCTGCATATC TCAGAGCACG GCAAAATTTG CGCGAAATAT
CCGGCTAAGG CGAAAGAACT GCGAACCGGT ACGCTTAATG CCGTCTCTGA TGAATGCATT
ATTTTTGATG AGTCCACTGC TGAAGGCGTG GGTGGTGATT TTTACGAGAT GAGTAACCGA
GCACAGGAGA TCACTGCATC AGGCTTATTG CTGACGGCAC AGGATTATAA ATTCCATTTT
TACGCCTGGT GGCAGGATCC TAAATACAGC GCCAGAGTGC CGGAAAGCGG GCTGAAGCTG
TCACGGGAAA AAATGACGTA TTTTTCTGCG GTTGAGAAGG CAATGAACAT CACGCTTACT
GATGAACAGA AGCAGTGGTA CATCAATAAG GAAACTGAAC AGCGTGAGGA AATGAAGCAG
GAGTTTCCCT CAACGCCACA GGAGGCGTTT CTGACGTCCG GACGACGTGT GTTCAGTGCC
GAAAGTACGT TGCAGGCAGA ATCATTCTGT TCGCCACCGA TGATTGTTTA TGACATTGAA
CCTGTTACAG GAGCGAAGAC TAAAGCTCAG TCTCTGCGTG AAGGAAATAA AAACGAGTTG
CAGCGGACGC TGATGAATTA TCTGCTGGTA TGGGAACTGC CGGATCCGGA TGAAGAGTAT
GTTTGTGGGG CAGATACTGC CGAAGGGCTG GAGCACGGAG ACCGCTCATC GCTGGATGTT
GTCAAACGCA GTAATGGCGA GCAGGTGGCT CACTGGTTCG GGCATCTCGA TGCTGAACTT
TTTGCTCATC TCATTTCGCA GGTCTGTCGT ATGTATAACA ACGCGTTTGT GGGGCCGGAG
CGTAATAATC ACGGACATGC AGTTATCCTG AAACTCCGGG AACTCTATCC GACACGTTAT
ATCTACAACG AACAGCATCT TGACCAGGCA TATGACGACG ATACGCCCCG CCTTGGCTGG
CTGACAACCC GTCAGAGCAA ACCTGTTCTG ACCGAAGGAA TGAAAACGCT TCTGAATAAT
GGAATATCAG GGATCCGCTG GTCAGGCACA TTATCGGAAA TGAACACCTA CGTTTATGAC
GCGAAAGGCT CCATGAATGC ACAGGAAGGC TGCTTTGATG ATCAGCTCAT GAGCTACATG
ATTGCCCAGG AGATGCGCGC CAGAATGCCG GTGAGGGTAA AACAGAAAAC GGATAAACGC
AGAACCACAC ACTGGATGGC ACACTGA
|
|---|
| Protein sequence | MTFRKNEPRC DEPSEMTEAE QRLFIMTKLS NPWWRLNHLY KIQNEKGELV TFRMRPAQRQ
LFRSMHNKNI ILKARQLGFS TAIDIYLLDQ ALFIPHLKCG IVAQDKQAAS EIFRTKIAVP
FDHLPDWLRA SFTIVERRSG ASGGYILFGH GSSIQVATSF RSGTVQRLHI SEHGKICAKY
PAKAKELRTG TLNAVSDECI IFDESTAEGV GGDFYEMSNR AQEITASGLL LTAQDYKFHF
YAWWQDPKYS ARVPESGLKL SREKMTYFSA VEKAMNITLT DEQKQWYINK ETEQREEMKQ
EFPSTPQEAF LTSGRRVFSA ESTLQAESFC SPPMIVYDIE PVTGAKTKAQ SLREGNKNEL
QRTLMNYLLV WELPDPDEEY VCGADTAEGL EHGDRSSLDV VKRSNGEQVA HWFGHLDAEL
FAHLISQVCR MYNNAFVGPE RNNHGHAVIL KLRELYPTRY IYNEQHLDQA YDDDTPRLGW
LTTRQSKPVL TEGMKTLLNN GISGIRWSGT LSEMNTYVYD AKGSMNAQEG CFDDQLMSYM
IAQEMRARMP VRVKQKTDKR RTTHWMAH
|
|---|
| |