| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3480 |
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| Symbol | |
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| ID | 6966571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3220670 |
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| End bp | 3223252 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643387286 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_002271749 |
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| Protein GI | 209396561 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGGA GTTATGTCAA TGCCTGGGCT GAAAATGAAA TTCAGTTTGA TTCCCGTTTT
CTGGAGTTAA AAGGCGACAC AAAAATCGAT CTGAAGCGAT TTTCCAGCCA GGGTTATGTC
GAACCTGGGA AATACAATTT ACAGGTTCAA CTAAATAAAC AGCCGCTGAC GGAAGAATAC
GATATTTACT GGTACGCCTC TGAGAACGAT GCCAGTAAAA CCTATGCCTG CCTGACGCCT
GAACTGGTCG CGCAGTTTGG CTTAAAAGAG GATGTGGCAA AAAACCTGCA ATGGATCCAC
GACGGCAAAT GCCTGAAACC CGGTCAACTG GAAGGCATTG ATATTAAAGC TGACCTGAGT
CAGTCAGCGT TAGTCATTTC ATTACCCCAG GCTTACCTTG AATATACCGA CATCAACTGG
GATCCGCCTT CACGCTGGGA TGACGGTATA TCTGGTTTAA TTGCTGACTA CAGTATTACC
GCCCAGACAC GACATGAAGA AAATGGCGGG GATGACAGCA ATGAAATTAG CGGTAACGGG
ACGGTTGGGG TGAACCTCGG CGCATGGCGT CTTCGTGCCG ACTGGCAGAC TGATTATTTG
CATAGTAAAA GCAATGATGA CGATGTTATC AACGGTGATG ACACGCAAAA AAACTGGGAG
TGGAGCCGCT ACTACGCCTG GCGAGCCTTA CCGTCGCTAA AAGCCAAACT TGGCCTTGGC
GAAGACTACC TGAATTCTGA TATTTTCGAC GGCTTTAACT ACGTGGGTGG CAGTATCAGC
ACCGACGATC AAATGTTGCC GCCGAATCTG CGCGGCTATG CGCCGGATAT CTCCGGCGTG
GCGCACACCA CCGCGAAAGT GACCGTCAGC CAGTTGGGCC GCGTCATCTA CGAAACCCAG
GTCCCGGCGG GGCCGTTCCG CATCCAGGAT CTTGGCGATT CGGTCTCCGG TACGCTGCAT
ATCCGCATTG AAGAACAGAA CGGTCAGGTG CAGGAATATG ACATCAACAC CGCCTCGATG
CCGTTCCTGA CTCGCCCCGG CCAGGTGCGC TATAAACTGA TGATGGGCCG CCCGCAGGAG
TGGGGGCACC ACGTGGAAGG CGGTTTCTTC TCCGGCGGCG AAGCTTCCTG GGGGATTGCC
AACGGCTGGT CGCTATACGG CGGGGCGCTG GCAGATGAAC ACTATCAGTC GGCGGCGCTT
GGCGTCGGTC GCGACCTGTC TGTGTTTGGT GCGGTGGCCT TTGATATCAC CCACTCGCAT
ACCCGTCTGG ATAAAGAGAC CGCCTACGGG AAAGGTTCAC TGGACGGCAA CTCGTTTCGC
CTGAGCTATT CCAAAGACTT CGATGAACTG AACAGCCGCG TCACTTTTGC CGGATACCGC
TTCTCGGAAG AGAACTTCAT GACCATGAGC GAGTATCTCG ATGCCAGCGA CAGCGAAATG
GTGCGCACCG GCAACGACAA AGAGATGTAC ACCGCCACCT ATAACCAGAA CTTCAGGGAT
GCCGGTGTGT CTGTTTATCT CAACTACACC CGCCATACCT ACTGGGATCG CGACGAACAG
ACCAACTACA ACGTCATGCT CTCGCACTAC TTCAACCTGG GCAGTATCCG CAACATGAGC
ATTTCCATGA CCGGATACCG CTACGAGTAT GACAACCAGG CCGATAAAGG TGTGTACATA
TCGCTCAGTA TGCCGTGGGG TGACAGCAGC ACCATCAGCT ATAACGGCAA CTACGGCAGC
GGTTCGGACA GCAGCCAGGT GGGGTATTTC AGCCGTGTCG ATGACGCAAC CCATTACCAG
TTGAACGTAG GCACCAGCGA CAATCACTCC AGCGTTGACG GTTATTACAG CCACGACGGA
TCGCTGGCGC AGGTCGATCT CAGCGCTAAC TACCATGAAG GGCAGTACAC CTCGGCGGGT
ATTTCCTTAC AGGGCGGCGC GACGCTCACC GCACAAGGTG GCGCGCTCCA CCGTACCCAG
AATATGGGCG GTACGCGTCT GCTGATTGAT GCCGACGGTG TGGCTGGTGT TCCGGTGGAA
GGAAATGGCG CGGCGGTTTA CACCAATATG TTCGGTAAGG CAGTGGTGGC AGACGTCAAC
AACTACTACC GCAACCAGGC GTATATCGAC CTAAACAACC TGCCGGAAAA CGCCGAAGCC
ACCCAGTCCG TGGTGCAGGC CACGCTTACC GAAGGGGCCA TTGGCTACCG TAAGTTCTCG
GTGATCAGCG GGCAAAAAGC GATGGCGGTG CTGCGTCTGC AAGATGGCAG TTATCCGCCG
TTTGGCGCGG AAGTGAAAAA CGACAGCGCG CAGAACGTCG GTCTGGTTGA CGATGACGGC
AACGTCTACC TCGCGGGCGT AAAACCTGGC GAGCATATGA TCGTTTCATG GGGCGGTGTG
GCCCACTGCG ATATTCATCT GCCTGACCCG CTGCCAGCCG ATCTGTTCAA TGGCCTGTTA
TTACCATGCC AGCAAACAGG GGCGATATCT CCTTCGATGC CTCATGAAAT TAAGCCGGTG
ATCCAGGAGC AGACCCAGCA GGTGATGCCA ACGGAAGCGC CAGTATCGGT ATCAGCCAAT
TAA
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| Protein sequence | MSGSYVNAWA ENEIQFDSRF LELKGDTKID LKRFSSQGYV EPGKYNLQVQ LNKQPLTEEY
DIYWYASEND ASKTYACLTP ELVAQFGLKE DVAKNLQWIH DGKCLKPGQL EGIDIKADLS
QSALVISLPQ AYLEYTDINW DPPSRWDDGI SGLIADYSIT AQTRHEENGG DDSNEISGNG
TVGVNLGAWR LRADWQTDYL HSKSNDDDVI NGDDTQKNWE WSRYYAWRAL PSLKAKLGLG
EDYLNSDIFD GFNYVGGSIS TDDQMLPPNL RGYAPDISGV AHTTAKVTVS QLGRVIYETQ
VPAGPFRIQD LGDSVSGTLH IRIEEQNGQV QEYDINTASM PFLTRPGQVR YKLMMGRPQE
WGHHVEGGFF SGGEASWGIA NGWSLYGGAL ADEHYQSAAL GVGRDLSVFG AVAFDITHSH
TRLDKETAYG KGSLDGNSFR LSYSKDFDEL NSRVTFAGYR FSEENFMTMS EYLDASDSEM
VRTGNDKEMY TATYNQNFRD AGVSVYLNYT RHTYWDRDEQ TNYNVMLSHY FNLGSIRNMS
ISMTGYRYEY DNQADKGVYI SLSMPWGDSS TISYNGNYGS GSDSSQVGYF SRVDDATHYQ
LNVGTSDNHS SVDGYYSHDG SLAQVDLSAN YHEGQYTSAG ISLQGGATLT AQGGALHRTQ
NMGGTRLLID ADGVAGVPVE GNGAAVYTNM FGKAVVADVN NYYRNQAYID LNNLPENAEA
TQSVVQATLT EGAIGYRKFS VISGQKAMAV LRLQDGSYPP FGAEVKNDSA QNVGLVDDDG
NVYLAGVKPG EHMIVSWGGV AHCDIHLPDP LPADLFNGLL LPCQQTGAIS PSMPHEIKPV
IQEQTQQVMP TEAPVSVSAN
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