Gene ECH74115_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3474 
Symbol 
ID6970154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3217987 
End bp3218508 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content45% 
IMG OID643387280 
Productfimbrial protein 
Protein accessionYP_002271743 
Protein GI209398508 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.855494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA ACCGTGCGTG GGCGCTTATC AGTGGTCTGA TATTGTTCAG CGGAACGGCC 
CCAGCTGCCG ATAACCTGCA TTTTACCGGT AATTTGCTTG GTAAATCCTG TACTCCTGTA
ATCAATGGCA ACTTACTTGC AGAAATTCAT TTCCCCACAA TTGCTGCCAG CGATTTAATG
CAACGTGGTC AGTCAGATCG CGTACCGTTA GTTTTTCAGT TGAAAGATTG CAAAAGCACC
ACGGCGTTTA ATGTCAAGGT GACCTTGATG GGAACAGAAG ATACCGACTT ACCAGGATTT
CTGTCGATTG ATTCGTCATC TTCTGCAACG GGTGTTGGGA TTGGCATTGA AACTGCCGGA
GGGGCGGCTG TACCTATTAA CAGTACCACA GGTGCCTCAT TTCCATTAAA TCAGGGAAAT
AACAGTGTCA ATTTTAATGC CTGGTTACAG ACCGTAAATG GACGAAATGT TACATCGGGT
GATTTCACCG CCACAATGAC GGTAACTTTT GAGTATTTTT AA
 
Protein sequence
MKNNRAWALI SGLILFSGTA PAADNLHFTG NLLGKSCTPV INGNLLAEIH FPTIAASDLM 
QRGQSDRVPL VFQLKDCKST TAFNVKVTLM GTEDTDLPGF LSIDSSSSAT GVGIGIETAG
GAAVPINSTT GASFPLNQGN NSVNFNAWLQ TVNGRNVTSG DFTATMTVTF EYF