Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3474 |
Symbol | |
ID | 6970154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3217987 |
End bp | 3218508 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643387280 |
Product | fimbrial protein |
Protein accession | YP_002271743 |
Protein GI | 209398508 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.855494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAATA ACCGTGCGTG GGCGCTTATC AGTGGTCTGA TATTGTTCAG CGGAACGGCC CCAGCTGCCG ATAACCTGCA TTTTACCGGT AATTTGCTTG GTAAATCCTG TACTCCTGTA ATCAATGGCA ACTTACTTGC AGAAATTCAT TTCCCCACAA TTGCTGCCAG CGATTTAATG CAACGTGGTC AGTCAGATCG CGTACCGTTA GTTTTTCAGT TGAAAGATTG CAAAAGCACC ACGGCGTTTA ATGTCAAGGT GACCTTGATG GGAACAGAAG ATACCGACTT ACCAGGATTT CTGTCGATTG ATTCGTCATC TTCTGCAACG GGTGTTGGGA TTGGCATTGA AACTGCCGGA GGGGCGGCTG TACCTATTAA CAGTACCACA GGTGCCTCAT TTCCATTAAA TCAGGGAAAT AACAGTGTCA ATTTTAATGC CTGGTTACAG ACCGTAAATG GACGAAATGT TACATCGGGT GATTTCACCG CCACAATGAC GGTAACTTTT GAGTATTTTT AA
|
Protein sequence | MKNNRAWALI SGLILFSGTA PAADNLHFTG NLLGKSCTPV INGNLLAEIH FPTIAASDLM QRGQSDRVPL VFQLKDCKST TAFNVKVTLM GTEDTDLPGF LSIDSSSSAT GVGIGIETAG GAAVPINSTT GASFPLNQGN NSVNFNAWLQ TVNGRNVTSG DFTATMTVTF EYF
|
| |