| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3453 |
|---|
| Symbol | cvpA |
|---|
| ID | 6968188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3197807 |
|---|
| End bp | 3198295 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643387259 |
|---|
| Product | colicin V production protein |
|---|
| Protein accession | YP_002271722 |
|---|
| Protein GI | 209398843 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTGGA TTGATTACGC CATAATCGCG GTGATTGCTT TTTCCTCTCT GGTTAGCCTG
ATCCGCGGCT TTGTTCGTGA AGCGTTATCG CTGGTGACAT GGGGTTGTGC TTTCTTTGTT
GCCAGTCATT ACTACACTTA CCTGTCAGTC TGGTTTACGG GCTTTGAAGA CGAACTGGTT
CGAAATGGGA TTGCCATCGC GGTCCTGTTT ATCGCCACCC TGATCGTTGG CGCTATCGTG
AACTTCGTGA TAGGCCTGCT GGTGGAGAAA ACGGGGTTGT CAGGCACCGA TCGGGTGCTG
GGCGTCTGTT TCGGTGCATT GCGCGGTGTG TTGATTGTTG CTGCTATTCT CTTCTTTCTC
GACTCCTTTA CCGGGGTGTC GAAAAGCGAA GACTGGAGTA AATCACAACT GATTCCGCAG
TTCAGTTTTA TCATCAGATG GTTTTTTGAT TATCTGCAAA GCTCGTCAAG TTTCTTGCCC
AGAGCGTAA
|
|---|
| Protein sequence | MVWIDYAIIA VIAFSSLVSL IRGFVREALS LVTWGCAFFV ASHYYTYLSV WFTGFEDELV
RNGIAIAVLF IATLIVGAIV NFVIGLLVEK TGLSGTDRVL GVCFGALRGV LIVAAILFFL
DSFTGVSKSE DWSKSQLIPQ FSFIIRWFFD YLQSSSSFLP RA
|
|---|
| |