| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3445 |
|---|
| Symbol | |
|---|
| ID | 6971833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3190181 |
|---|
| End bp | 3191071 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643387251 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002271714 |
|---|
| Protein GI | 209396022 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5464] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.143681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAT CGACAACTTC CACGCCGCAT GATGCGGTAT TTAAATCTTT TTTACGCCAT
CCAGACACCG CGCGGGATTT TATTGATATT CATCTTCCCG CGCCGCTGCG CAAACTGTGT
GATTTAACGA CGCTTAAACT GGAACCAAAC AGTTTTATTG ATGAAGACCT GCGGCAATAT
TATTCCGACC TCTTGTGGTC TGTGAAAACG CAGGAGGGAG TGGGTTATCT TTATGTAGTG
ATAGAGCACC AAAGTAAGCC GGAAGAATTA ATGGCTTTTC GCATGATGCG TTATTCCATT
GCGGCAATGC AAAACCATCT TGATGTGGGC TATAAAGAGC TTCCATTGGT GATCCCGATG
CTGTTTTATC ATGGTTGCAG AAGTCCTTAT CCTTATTCAC TCTGCTGGCT TGATGAATTT
GCCGAGCCTG CGATTGCCCG TAAAATATAT TCATCGGCTT TTCCGTTGGT GGATATTACC
GTGGTGCCGG ATGACGAGAT TATGCAACAT CGTAAAATGG CGCTGTTGGA GTTAATTCAG
AAACATATTC GTCAGCGCGA TCTGTTGGGA TTAGTCGACC AAATTGTTTC GCTGCTAGTT
ACAGGGAACA CTAATGACAG ACAGCTAAAA GCCCTGTTTA ATTATGTATT ACAAACGGGA
GATGCCCAGC GTTTCCGTGC ATTTATTGGT GAGATAACAG AACGCGCACC ACAAGAAAAG
GAGAAACTGA TGACCATTGC TGACAGATTA CGTGAAGAAG GCGCAATGCA GGGCAAACAC
GAAGAAGCTC TGCGTATTGC TCAGGAGATG CTGGAAAAAG GATTTGACCA CGAAGTCATC
CTGACGCTGA CCCGACTTTC ACCAGACGAT CTTATCGCGC AAAGCCACTA A
|
|---|
| Protein sequence | MTISTTSTPH DAVFKSFLRH PDTARDFIDI HLPAPLRKLC DLTTLKLEPN SFIDEDLRQY
YSDLLWSVKT QEGVGYLYVV IEHQSKPEEL MAFRMMRYSI AAMQNHLDVG YKELPLVIPM
LFYHGCRSPY PYSLCWLDEF AEPAIARKIY SSAFPLVDIT VVPDDEIMQH RKMALLELIQ
KHIRQRDLLG LVDQIVSLLV TGNTNDRQLK ALFNYVLQTG DAQRFRAFIG EITERAPQEK
EKLMTIADRL REEGAMQGKH EEALRIAQEM LEKGFDHEVI LTLTRLSPDD LIAQSH
|
|---|
| |