| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3317 |
|---|
| Symbol | |
|---|
| ID | 6967116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3051565 |
|---|
| End bp | 3052590 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643387129 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_002271593 |
|---|
| Protein GI | 209398171 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.655724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.274397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGAC TCAACCCCGT CAATCAGGCC CGTTGGGCGC GTTTTCGCCA TAACCGTCGC
GGCTACTGGT CGTTATGGAT TTTCCTCGTT TTGTTTGGTT TGAGTTTGTG TTCTGAACTT
ATCGCCAACG ATAAACCGTT GCTGGTGCGT TATGACGGCA GTTGGTATTT CCCGTTGTTG
AAAAACTACA GCGAAAGCGA TTTTGGCGGC CCGCTGGCAA GTCAGGCTGA TTATCAGGAC
CCGTGGCTGA AACAACGGCT GGAAAATAAT GGCTGGGTAC TGTGGGCACC GATTCGCTTT
GGTGCTACCA GTATCAACTT TGCTACCGAT AAGCCCTTCC CTTCTCCCCC CTCCCGGCAA
AACTGGCTGG GAACGGATGC CAACGGCGGC GATGTGCTGG CACGTATTCT CTATGGCACG
CGGATCTCGG TTCTGTTTGG CCTGATGCTG ACTCTCTGTT CCAGCGTGAT GGGCGTGCTG
GCGGGGGCGC TACAAGGCTA TTACGGCGGT AAGGTCGATC TCTGGGGGCA GCGCTTTATT
GAAGTATGGT CGGGGATGCC AACGCTGTTT TTGATTATTC TGCTTTCCAG CGTTGTGCAA
CCTAACTTCT GGTGGCTGCT GGCAATTACT GTCTTATTTG GCTGGATGAG TCTGGTCGGC
GTGGTGCGGG CGGAGTTTTT ACGTACCCGC AATTTCGACT ACATCCGCGC GGCACAGGCG
CTTGGCGTCA GCGATCGCAG TATTATTCTG CGTCATATGT TGCCGAATGC AATGGTCGCT
ACCCTCACCT TTTTACCGTT TATTTTATGT AGTTCGATCA CCACCCTGAC CTCACTCGAT
TTCCTCGGCT TCGGTCTGCC GCTCGGTTCA CCGTCACTCG GTGAACTGCT GTTACAAGGG
AAAAATAACC TTCAGGCTCC GTGGCTTGGG ATCACCGCCT TCTTGTCGGT GGCGATATTA
TTGTCTTTGC TGATCTTTAT TGGTGAAGCC GTCCGCGACG CATTTGATCC TAATAAGGCG
GTGTAG
|
|---|
| Protein sequence | MSRLNPVNQA RWARFRHNRR GYWSLWIFLV LFGLSLCSEL IANDKPLLVR YDGSWYFPLL
KNYSESDFGG PLASQADYQD PWLKQRLENN GWVLWAPIRF GATSINFATD KPFPSPPSRQ
NWLGTDANGG DVLARILYGT RISVLFGLML TLCSSVMGVL AGALQGYYGG KVDLWGQRFI
EVWSGMPTLF LIILLSSVVQ PNFWWLLAIT VLFGWMSLVG VVRAEFLRTR NFDYIRAAQA
LGVSDRSIIL RHMLPNAMVA TLTFLPFILC SSITTLTSLD FLGFGLPLGS PSLGELLLQG
KNNLQAPWLG ITAFLSVAIL LSLLIFIGEA VRDAFDPNKA V
|
|---|
| |