Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3316 |
Symbol | |
ID | 6970293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3050471 |
End bp | 3051565 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643387128 |
Product | ABC transporter, permease protein |
Protein accession | YP_002271592 |
Protein GI | 209396226 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.655724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.226821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCTT ATCTGATTCG CCGTCTGTTG CTGGTGATCC CAACGTTATG GGCGATTATC ACTATCAACT TTTTCATCGT GCAAATTGCG CCTGGCGGTC CGGTCGACCA GGCCATCGCC GCCATTGAGT TTGGTAATGC CGGAGTATTA CCCGGCGCAG GCGGTGAAGG CGTTCGCGCC AGCCATGCGC AAACGGGCGT CGGTAATATC AGCGACAGTA ATTACCGTGG CGGACGCGGA TTAGATCCAG AAGTGATCGC CGAGATCACT CATCGCTACG GTTTCGATAA GCCGATCCAC GAACGTTACT TCAAAATGCT CTGGGACTAC ATCCGCTTTG ATTTTGGCGA TAGCCTGTTT CGCAGCGCCT CGGTGCTGAC GCTGATTAAA GACAGTCTGC CGGTTTCCAT CACCCTCGGA TTGTGGAGCA CGCTGATTAT CTATCTGGTG TCGATTCCGT TAGGCATTCG CAAAGCTGTT TATAATGGGA GCCGCTTTGA CGTCTGGAGT AGCGCATTTA TCATCATCGG CTACGCCATT CCGGCCTTTT TGTTTGCCAT CCTGCTGATT GTCTTCTTCG CAGGCGGCAG CTATTTCGAC CTGTTCCCTC TACGCGGCCT GGTTTCCGCT AACTTTGATT CGCTGCCGTG GTATCAGAAA ATCACCGATT ATCTGTGGCA TATCACGCTG CCGGTGCTGG CGACGGTGAT TGGTGGCTTT GCGGCGCTGA CTATGCTGAC AAAAAACTCA TTCCTTGATG AAGTACGCAA GCAATACGTG GTGACCGCGC GTGCGAAAGG GGTAAGTGAA AAAAATATTC TCTGGAAACA TGTGTTCCGC AACGCCATGC TGCTGGTGAT TGCCGGTTTT CCGGCGACGT TTATCAGCAT GTTTTTTACC GGCTCGCTGC TGATTGAGGT GATGTTTTCA CTCAATGGTC TTGGCTTACT GGGCTACGAA GCGACCGTCT CGCGCGATTA TCCTGTAATG TTTGGTACCT TGTATATTTT CACCCTGATT GGCCTGCTGC TGAATATTGT CAGTGATATC AGCTATACGC TGGTCGATCC GCGTATAGAT TTTGAGGGAC GTTAA
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Protein sequence | MGAYLIRRLL LVIPTLWAII TINFFIVQIA PGGPVDQAIA AIEFGNAGVL PGAGGEGVRA SHAQTGVGNI SDSNYRGGRG LDPEVIAEIT HRYGFDKPIH ERYFKMLWDY IRFDFGDSLF RSASVLTLIK DSLPVSITLG LWSTLIIYLV SIPLGIRKAV YNGSRFDVWS SAFIIIGYAI PAFLFAILLI VFFAGGSYFD LFPLRGLVSA NFDSLPWYQK ITDYLWHITL PVLATVIGGF AALTMLTKNS FLDEVRKQYV VTARAKGVSE KNILWKHVFR NAMLLVIAGF PATFISMFFT GSLLIEVMFS LNGLGLLGYE ATVSRDYPVM FGTLYIFTLI GLLLNIVSDI SYTLVDPRID FEGR
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