| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3298 |
|---|
| Symbol | rihB |
|---|
| ID | 6967821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3030535 |
|---|
| End bp | 3031476 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643387110 |
|---|
| Product | ribonucleoside hydrolase 2 |
|---|
| Protein accession | YP_002271574 |
|---|
| Protein GI | 209396314 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0466718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.0924764 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA GAAAAATTAT TCTGGATTGT GATCCGGGTC ATGATGATGC TATTGCTATA
ATGATGGCGG CGAAACATCC GGCAATAGAT TTATTAGGCA TCACTATTGT AGCGGGTAAT
CAGACGCTTG ATAAAACATT AATTAATGGC CTGAATGTTT GCCAGAAACT GGAGATTAAT
GTTCCGGTTT ATGCGGGGAT GCCACAACCC ATTATGCGGC AACAAATCGT TGCCGATAAT
ATTCACGGTG ATACCGGACT GGATGGCCCG GTATTCGAGC CGCTGACCCG CCAGGCAGAA
AGCACTCATG CGGTGAAATA CATCATTGAT ACCCTGATGG CAAGCGATGG CGATATCACT
CTGGTGCCGG TTGGTCCGCT TTCAAATATC GCGGTGGCAA TGCGTATGCA ACCCGCGATC
CTGCCCAAAA TCCGTGAAAT TGTGCTAATG GGCGGCGCTT ACGGTACAGG CAACTTCACG
CCATCTGCCG AGTTCAACAT CTTTGCTGAC CCGGAAGCCG CACGCGTGGT GTTCACCTCT
GGCGTTCCAT TAGTGATGAT GGGCCTCGAT CTCACCAACC AGACCGTTTG CACCCCGGAC
GTGATTGCAC GAATGGAAAG GGCAGGCGGC CCTGCCGGAG AGCTGTTCAG CGACATCATG
AACTTCACTC TCAAAACCCA GTTCGAAAAC TACGGCCTGG CTGGCGGCCC GGTGCACGAC
GCCACCTGCA TCGGTTATCT GATTAACCCT GATGGCATTA AAACCCAGGA GATGTACGTC
GAAGTGGACG TCAACAGTGG CCCTTGTTAT GGGCGTACCG TCTGCGACGA GCTGGGCGTT
CTTGGCAAGC CCGCTAATAC CAAAGTCGGC ATCACTATTG ATAGCGACTG GTTCTGGGGC
TTAGTCGAAG AGTGCGTGCG CGGCTACATC AAAACCCATT AA
|
|---|
| Protein sequence | MEKRKIILDC DPGHDDAIAI MMAAKHPAID LLGITIVAGN QTLDKTLING LNVCQKLEIN
VPVYAGMPQP IMRQQIVADN IHGDTGLDGP VFEPLTRQAE STHAVKYIID TLMASDGDIT
LVPVGPLSNI AVAMRMQPAI LPKIREIVLM GGAYGTGNFT PSAEFNIFAD PEAARVVFTS
GVPLVMMGLD LTNQTVCTPD VIARMERAGG PAGELFSDIM NFTLKTQFEN YGLAGGPVHD
ATCIGYLINP DGIKTQEMYV EVDVNSGPCY GRTVCDELGV LGKPANTKVG ITIDSDWFWG
LVEECVRGYI KTH
|
|---|
| |