Gene ECH74115_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3286 
Symbol 
ID6967278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3018165 
End bp3019322 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content54% 
IMG OID643387099 
Producthypothetical protein 
Protein accessionYP_002271563 
Protein GI209395998 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.385085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCA ACGTCACGCT CGACTTTGTT CGCGGCGTCG CCATTCTGGG GATCCTGCTA 
TTAAACATCA GCGCCTTTGG GCTACCAAAG GCGGCTTATC TTAATCCCGC CTGGTACGGC
GCTATTACGC CGCAGGATGC ATGGACCTGG GCATTTCTCG ATCTCATCGG CCAGGTGAAA
TTCCTCACGC TTTTTGCGCT GCTGTTTGGT GCTGGCCTGC AAATGTTGCT GCCCCGTGGC
AGACGCTGGA TCCAGTCGCG GTTAACGCTG TTAGTCTTGC TGGGCTTTAT TCACGGTTTA
TTGTTCTGGG ACGGCGATAT TCTGCTGGCT TACGGGCTGG TGGGCTTAAT CTGCTGGCGG
CTGGTGCGCG ATGCGCCATC GGTAAAAAGC CTTTTTAATA CCGGCGTCAT GCTTTATCTG
GTGGGGCTTG GCGTTTTGCT GTTATTGGGG TTGATTTCCG ATAGCCAGAC TAGCCGCGCC
TGGACGCCGG ATGCATCGGC TATTTTATAT GAAAAATACT GGAAGCTTCA CGGCGGCGTT
GAAGCGATCA GTAATCGTGC CGATGGTGTT GGGAACAGTT TATTGGCACT GGGCGCACAG
TATGGCTGGC AACTGGCTGG GATGATGCTC ATTGGTGCCG CATTGATGCG CAGTGGCTGG
CTGAAAGGGC AGTTCAGCTT ACGTCACTAT CGTCGTACTG GTTTTGTGCT AGTGGCGATT
GGGGTGATCA TTAACCTTCC TGCCATCGCC CTGCAATGGC AGCTGGACTG GGCGTATCGC
TGGTGTGCCT TCTTACTTCA AATGCCGCGG GAACTGAGTG CGCCGTTTCA GGCGATTGGC
TATGCGTCGC TGTTTTATGG CTTCTGGCCG CAATTGAGCC GCTTTAAGCT GGTGCTGGCG
ATCGCCTGCG TCGGACGGAT GGCGCTGACC AACTATCTAT TGCAAACGCT GATTTGTACC
ACGCTTTTTT ACCACCTCGG TCTGTTTATG CAGTTTGACC GTCTGGAATT GCTGGCGTTT
GTTATTCCGG TATGGCTGGC GAATATTCTC TTCTCTGTTA TCTGGCTGCG TTACTTCCGC
CAGGGGCCGG TGGAATGGCT CTGGCGTCAG TTAACTTTGC GTGCTGCCGG ACCGGCAATA
TCTAAAACAT CAAGATAA
 
Protein sequence
MERNVTLDFV RGVAILGILL LNISAFGLPK AAYLNPAWYG AITPQDAWTW AFLDLIGQVK 
FLTLFALLFG AGLQMLLPRG RRWIQSRLTL LVLLGFIHGL LFWDGDILLA YGLVGLICWR
LVRDAPSVKS LFNTGVMLYL VGLGVLLLLG LISDSQTSRA WTPDASAILY EKYWKLHGGV
EAISNRADGV GNSLLALGAQ YGWQLAGMML IGAALMRSGW LKGQFSLRHY RRTGFVLVAI
GVIINLPAIA LQWQLDWAYR WCAFLLQMPR ELSAPFQAIG YASLFYGFWP QLSRFKLVLA
IACVGRMALT NYLLQTLICT TLFYHLGLFM QFDRLELLAF VIPVWLANIL FSVIWLRYFR
QGPVEWLWRQ LTLRAAGPAI SKTSR