Gene ECH74115_3264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3264 
Symbol 
ID6966975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2996785 
End bp2997546 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID643387077 
Productacetoin dehydrogenase 
Protein accessionYP_002271541 
Protein GI209396086 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0298905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG TAGCGATTAT TACCGCCTCC GATTCGGGGA TCGGCAAAGA GTGCGCGTTA 
TTACTGGCGC AGCAAGGGTT TGATATTGGC ATTACCTGGC ACTCAGATGA AGAAGGGGCA
AAAGATACCG CGCGTGAGGT AGTTAGCCAC GGCGTACGTG CGGAGATCGT GCAACTGGAT
CTCGGCAATC TGCCAGAAGG TGCGCAGGCG CTGGAGAAAC TTATTCAACG GCTGGGGCGT
ATTGATGTGC TGGTGAATAA TGCGGGCGCA ATGACCAAAG TGCCGTTTCT TGATATGGCT
TTCGATGAGT GGCGCAAGAT TTTTACCGTT GATGTCGATG GTGCATTTTT ATGCTCGCAA
ATTGCTGCCC GCCAGATGGT GAAACAAGGA CAGGGTGGTC GCATCATCAA CATTACGTCG
GTACATGAAC ATACGCCGCT GCCGGATGCC AGCGCCTACA CAGCCGCTAA ACATGCGCTC
GGCGGGTTAA CCAAAGCAAT GGCGCTGGAG TTGGTCAGGC ATAAGATTTT GGTGAACGCA
GTCGCACCTG GGGCGATCGC TACGCCAATG AACGGCATGG ATGATAGCGA CGTGAAGCCC
GACGCGGAGC CTTCGATTCC TCTGCGGCGT TTTGGCGCAA CGCATGAGAT TGCCAGCCTG
GTGGCGTGGC TTTGTTCGGA GGGCGCAAAT TACACCACCG GGCAGTCGTT GATAGTGGAT
GGCGGCTTTA TGTTGGCGAA TCCGCAGTTC AACCCAGAAT AG
 
Protein sequence
MAQVAIITAS DSGIGKECAL LLAQQGFDIG ITWHSDEEGA KDTAREVVSH GVRAEIVQLD 
LGNLPEGAQA LEKLIQRLGR IDVLVNNAGA MTKVPFLDMA FDEWRKIFTV DVDGAFLCSQ
IAARQMVKQG QGGRIINITS VHEHTPLPDA SAYTAAKHAL GGLTKAMALE LVRHKILVNA
VAPGAIATPM NGMDDSDVKP DAEPSIPLRR FGATHEIASL VAWLCSEGAN YTTGQSLIVD
GGFMLANPQF NPE