Gene ECH74115_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3039 
Symbol 
ID6967449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2819483 
End bp2820118 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content60% 
IMG OID643386871 
Productphage baseplate assembly protein GpV 
Protein accessionYP_002271339 
Protein GI209399626 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0000239621 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACTC TCGCAAATAT CCAGGAACTC GCGCGCGCAC TGCGCAACAT GATTCGCACC 
GGCCTTGTCG TCGAAACCGA CCTTAACGCC GGTCGCTGCC GTGTGCAGAC CGGCGGCATG
TGCACCGACT GGCTTCAGTG GCTGACTTGT CGTGCCGGGC GTTCGCGCAC ATGGTGGGCA
CCTTCCGTGG GGGAGCAGGT GCTGATTCTG GCCGTGGGCG GTGAACTTGA CACAGCGTTT
GTTCTGCCGG GGATTTATTC CGGCGATAAC CCCGCGCCGT CTGCGTCGGC GGATGCCCTG
CATATCCGTT TCCCTGACGG GGCGGTGATT GAGTATGAAC CTGAAACCAG TGCACTGACG
GTAAGCGGAA TTAAAACGGC CAGCGTGACG GCTTCTGATT CTGTTACTGC CACGGTGCCG
GTGGTCATGG TGAAAGCGTC AACCCGCATC ACCCTGGACA CACCGGAGGT GGTCTGCACC
AACAGGCTGA TTACCGGCAC GCTGGAAGTA CAGAAGGGCG GGACGATGCG CGGCAACATT
GAACACACCG GTGGTGAACT CTCATCAAAC GGTAAGGTAC TGCATACCCA TAAACACCCC
GGCGACAGCG GCGGCACAAC CGGGAGTCCT TTATGA
 
Protein sequence
MNTLANIQEL ARALRNMIRT GLVVETDLNA GRCRVQTGGM CTDWLQWLTC RAGRSRTWWA 
PSVGEQVLIL AVGGELDTAF VLPGIYSGDN PAPSASADAL HIRFPDGAVI EYEPETSALT
VSGIKTASVT ASDSVTATVP VVMVKASTRI TLDTPEVVCT NRLITGTLEV QKGGTMRGNI
EHTGGELSSN GKVLHTHKHP GDSGGTTGSP L