Gene ECH74115_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3038 
Symbol 
ID6971436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2819139 
End bp2819486 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content56% 
IMG OID643386870 
Productbaseplate assembly protein GpW 
Protein accessionYP_002271338 
Protein GI209396536 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0000459686 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGCGC GTTATCTCGG AATGAATCGC AGTGATGGCC TGACTGTCAC TGACCTTGAG 
CATATCAGCC AGAGTATCGG CGATATCCTG CGTACACCGG TCGGCTCACG GGTGATGCGT
CGTGATTACG GCTCGTTGCT GGCATTAATG ATTGACCAGC CGCAGACCCC GGCGCTTGAG
TTGCAGATTA AGGTCGCCTG TTACATGGCG GTGCTGAAAT GGGAACCCCG CGTCACCCTG
TCATCCGTCA CTACTGAGCG CAGTTTTGAC GGGCGAATGA CGGTCACGTT AACCGGCCAG
CACAACGACA CCGGCCAGCC ACTTTCGTTA ACCATCCCTG TGAGTTGA
 
Protein sequence
MTARYLGMNR SDGLTVTDLE HISQSIGDIL RTPVGSRVMR RDYGSLLALM IDQPQTPALE 
LQIKVACYMA VLKWEPRVTL SSVTTERSFD GRMTVTLTGQ HNDTGQPLSL TIPVS