9 homologs were found in PanDaTox collection
for query gene ECH74115_2812 on replicon NC_011353
Organism: Escherichia coli O157:H7 str. EC4115



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011353  ECH74115_2812    100 
 
 
120 bp  238  3e-61  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00228705  normal 
 
 
-
 
NC_011353  ECH74115_2216    100 
 
 
123 bp  97.6  6e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000442773  hitchhiker  4.13469e-17 
 
 
-
 
NC_012892  B21_01534  hypothetical protein  100 
 
 
276 bp  97.6  6e-19  Escherichia coli BL21  Bacteria  decreased coverage  0.00010823  n/a   
 
 
-
 
NC_010498  EcSMS35_1155  hypothetical protein  97.96 
 
 
123 bp  89.7  1e-16  Escherichia coli SMS-3-5  Bacteria  unclonable  0.000000000131016  hitchhiker  1.0145500000000001e-18 
 
 
-
 
NC_011353  ECH74115_1142    97.96 
 
 
141 bp  89.7  1e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.482528 
 
 
-
 
NC_011353  ECH74115_1748  hypothetical protein  97.96 
 
 
123 bp  89.7  1e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000000287138  hitchhiker  0.0000214648 
 
 
-
 
NC_011353  ECH74115_2281  hypothetical protein  97.96 
 
 
171 bp  89.7  1e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000221503  decreased coverage  2.18634e-18 
 
 
-
 
NC_011353  ECH74115_1824    100 
 
 
192 bp  87.7  6e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00000129456  decreased coverage  0.00000000000000348429 
 
 
-
 
NC_011353  ECH74115_3175    100 
 
 
192 bp  87.7  6e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.0000006651  decreased coverage  5.71482e-19 
 
 
-
 
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