Gene ECH74115_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2746 
SymbolhchA 
ID6971307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2567985 
End bp2568836 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content49% 
IMG OID643386601 
Productchaperone protein HchA 
Protein accessionYP_002271080 
Protein GI209397833 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00628542 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.255888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC AAACCAGTAA AAATCCGCAG GTCGATATTG CTGAAGATAA TGCATTCTTC 
CCTTCAGAAT ATTCGCTTAG CCAATATACC AGTCCTGTCT CTGATCTTGA TGGCGTGGAC
TATCCAAAAC CTTATCGCGG TAAACATAAA ATTCTGGTGA TCGCCGCGGA CGAACGTTAT
TTGCCGACCG ATAACGGAAA ACTGTTCTCG ACCGGTAACC ATCCGATTGA AACGTTGCTG
CCGTTGTATC ATCTCCATGC TGCAGGTTTC GAATTCGAAG TGGCGACCAT TTCCGGTCTG
ATGACCAAGT TTGAATACTG GGCTATGCCG CAGAAAGATG AAAAAGTAAT GCCATTCTTT
GAGCAGCATA AATCGTTGTT CCGCAATCCG AAGAAACTCG CGGATGTTGT CGCCAGCCTC
AACGCTGATA GCGAATATGC AGCAATCTTT GTTCCTGGTG GTCATGGCGC ACTTATTGGT
TTACCTGAAA GCCAGGACGT AGCTGCCGCT TTACAGTGGG CAATCAAAAA TGACCGTTTT
GTTATCTCCC TTTGCCACGG CCCGGCGGCT TTTCTGGCGC TTCGCCACGG CGATAATCCA
CTGAATGGTT ATTCCATTTG CGCATTCCCA GACGCCGCAG ACAAACAAAC GCCAGAGATT
GGCTATATGC CGGGTCATCT CACCTGGTAC TTCGGCGAAG AACTGAAGAA AATGGGCATG
AACATCATTA ATGACGACAT CACCGGGCGA GTACATAAGG ACCGTAAACT TCTCACCGGC
GACAGTCCTT TTGCAGCGAA TGCGTTGGGT AAACTGGCGG CGCAGGAAAT GCTGGCAGCT
TACGCGGGTT AA
 
Protein sequence
MTVQTSKNPQ VDIAEDNAFF PSEYSLSQYT SPVSDLDGVD YPKPYRGKHK ILVIAADERY 
LPTDNGKLFS TGNHPIETLL PLYHLHAAGF EFEVATISGL MTKFEYWAMP QKDEKVMPFF
EQHKSLFRNP KKLADVVASL NADSEYAAIF VPGGHGALIG LPESQDVAAA LQWAIKNDRF
VISLCHGPAA FLALRHGDNP LNGYSICAFP DAADKQTPEI GYMPGHLTWY FGEELKKMGM
NIINDDITGR VHKDRKLLTG DSPFAANALG KLAAQEMLAA YAG