Gene ECH74115_2674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2674 
Symbol 
ID6971040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2516143 
End bp2516655 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content54% 
IMG OID643386535 
Productphage major tail tube protein 
Protein accessionYP_002271017 
Protein GI209399311 
COG category[R] General function prediction only 
COG ID[COG3498] Phage tail tube protein FII 
TIGRFAM ID[TIGR01611] phage contractile tail tube protein, P2 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0110743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAC CAAAACATCT TCGCTTTTTT ACGCTGTTTG TGGATGGTGA AAACGAAGTG 
GGTAAGGTGA CGTCCGTCAC CCTGCCTAAA CTGACGCGCA AAACCGACAG CTACCGGGGT
GGTGGCATGA TGGGTGCGGT AAGTATTGAC CTCGGCCTGG ACGACTCCGC GCTTGATGCG
AGCTTTGTCA TGGGGGGCGC AGTTCGTGAG CTGTTCCTGA AGTATGGCGG CACGATTGAC
GGCACGCTAC TGCGTTTTGC GGGGGAATAC TACACCGATG ATGAAAGCGA CCTGTATGAA
GTCGAAATGC GCGGACGTGT GACGGAAATT GATATGGGGG AAGCCAAACA GGGCGAAGCC
ACATCACACA CTTACGCCAT TAAAAACACC TACTACAAGC TGAGTGTTAA CGATCGCCCG
TTGTGGGAGA TTGACCTGCT GAACTTCATT TACCGGAAGG ACGGCAAGGA CATTGTGCCC
GATCGCATCC GTTCCGCGCT TGGGCTTGGC TGA
 
Protein sequence
MAVPKHLRFF TLFVDGENEV GKVTSVTLPK LTRKTDSYRG GGMMGAVSID LGLDDSALDA 
SFVMGGAVRE LFLKYGGTID GTLLRFAGEY YTDDESDLYE VEMRGRVTEI DMGEAKQGEA
TSHTYAIKNT YYKLSVNDRP LWEIDLLNFI YRKDGKDIVP DRIRSALGLG