| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2589 |
|---|
| Symbol | |
|---|
| ID | 6970875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2444777 |
|---|
| End bp | 2445646 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643386454 |
|---|
| Product | DNA-binding transcriptional regulator HexR |
|---|
| Protein accession | YP_002270936 |
|---|
| Protein GI | 209400498 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00161066 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.817634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGC TGGAAAAAAT CCAGTCTCAG CTGGAACATT TGAGCAAATC AGAGCGCAAA
GTTGCCGAGG TCATTCTGGC TTCGCCCGAT AACGCGATCC ATTCGAGTAT TGCTGCTCTG
GCACTGGAAG CCAATGTTAG CGAACCGACG GTGAATCGTT TCTGTCGCAG CATGGACACG
CGCGGTTTTC CTGATTTTAA ACTTCATCTG GCACAGAGTC TGGCGAATGG CACTCCCTAT
GTTAATCGCA ACGTCAATGA AGATGACAGC GTTGAATCAT ACACAGGGAA AATATTTGAG
TCCGCAATGG CAACGCTCGA TCATGTCCGT CATTCACTGG ATAAATCTGC CATCAACCGC
GCCGTCGACT TGCTCACTCA GGCAAAAAAA ATCGCCTTTT TCGGATTAGG CTCTTCAGCC
GCCGTTGCCC ACGATGCGAT GAATAAGTTC TTTCGTTTTA ATGTTCCGGT GGTGTACTCC
GATGATATTG TGCTGCAACG CATGAGTTGT ATGAATTGTA GCGACGGAGA CGTGGTGGTG
CTGATTTCTC ACACCGGAAG AACAAAAAAT CTGGTCGAGC TGGCGCAGCT GGCACGCGAA
AACGACGCTA TGGTGATTGC CCTCACCTCT GCGGGTACCC CGCTCGCCCG GGAAGCAACG
CTGGCAATTA CCCTCGACGT ACCGGAAGAT ACTGACATTT ATATGCCCAT GGTTTCTCGA
CTTGCACAGC TGACCGTGAT AGATGTGCTG GCGACAGGAT TTACTTTGCG ACGCGGTGCA
AAATTCAGAG ATAACTTGAA GCGGGTCAAG GAAGCGCTGA AGGAATCGCG TTTTGATAAG
CAGTTACTTA ATTTAAGTGA CGATCGCTAA
|
|---|
| Protein sequence | MNMLEKIQSQ LEHLSKSERK VAEVILASPD NAIHSSIAAL ALEANVSEPT VNRFCRSMDT
RGFPDFKLHL AQSLANGTPY VNRNVNEDDS VESYTGKIFE SAMATLDHVR HSLDKSAINR
AVDLLTQAKK IAFFGLGSSA AVAHDAMNKF FRFNVPVVYS DDIVLQRMSC MNCSDGDVVV
LISHTGRTKN LVELAQLARE NDAMVIALTS AGTPLAREAT LAITLDVPED TDIYMPMVSR
LAQLTVIDVL ATGFTLRRGA KFRDNLKRVK EALKESRFDK QLLNLSDDR
|
|---|
| |