Gene ECH74115_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2578 
Symbol 
ID6971933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2433565 
End bp2434221 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content52% 
IMG OID643386443 
Producthydrolase, carbon-nitrogen family 
Protein accessionYP_002270925 
Protein GI209399166 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.484509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCT GGAAAGTTGC AGCAGCGCAA TATGAGCCTC GTAAAACCTC ACTCACCGAA 
CAGGTAGCTC ATCATCTGGA GTTTGTGAGG GCCGCCGCCA GGCAACAATG TCAGCTGTTA
GTTTTTCCAT CGCTTTCTTT ACTGGGGTGT GATTATTCGC GACGTGCCCT TCCTGCCCCA
CCCGATCTCT CACTGTTAGA CCCGCTTTGT TATGCCGCAA CGACCTGGCG AATGACCATC
ATTGCCGGCC TTCCCGTTGA ATATAACGAT CGCTTTATTC GTGGAATTGC GGTGTTCGCA
CCGTGGCGAA AAACGCCTGG GATCTACCAT CAGAGTCATG GTGCATGTCT GGGCCGTCGT
TCCAGAACCA TCACGGTGGT CGATGAACAA CCGCAAGGTA TGGATATGGA CCCGACCTGT
TCACTGTTTA CGACAGGGCA ATGTCTGGGA GAACCCGACC TGCTGGCATC GGCCCGTCGC
TTACAATTTT TTTCACATCA GTACTCGATT GCTGTGCTGA TGGCAAATGC CCGTGGTAAC
AGTGCACTAT GGGATGAACA TGGTCGTCTC ATCGTTCGCG CCGATCGTGG TTCATTATTG
TTAGTCGGTC AGCGTTCATC ACAGGGTTGG CAAGGCGATA TCATTCCATT ACGCTAG
 
Protein sequence
MSFWKVAAAQ YEPRKTSLTE QVAHHLEFVR AAARQQCQLL VFPSLSLLGC DYSRRALPAP 
PDLSLLDPLC YAATTWRMTI IAGLPVEYND RFIRGIAVFA PWRKTPGIYH QSHGACLGRR
SRTITVVDEQ PQGMDMDPTC SLFTTGQCLG EPDLLASARR LQFFSHQYSI AVLMANARGN
SALWDEHGRL IVRADRGSLL LVGQRSSQGW QGDIIPLR