| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2460 |
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| Symbol | cho |
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| ID | 6967670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2329321 |
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| End bp | 2330208 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643386328 |
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| Product | nucleotide excision repair endonuclease |
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| Protein accession | YP_002270810 |
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| Protein GI | 209400159 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.41654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTACGGC GTTTAACTTC TCCGCGGCTC GAATTTGAAG CTGCGGCAAT TTATGAATAT
CCCGAACATT TACGTTCATT CCTTAATGAC TTACCCACCC GACCAGGGGT GTATCTGTTT
CATGGCGAAA GTGACACCAT GCCGCTCTAT ATCGGCAAAA GCGTTAATAT CCGCAGTCGG
GTGCTTTCTC ATTTACGCAC CCCGGATGAA GCCGCCATGC TACGGCAATC CCGGCGAATT
AGCTGGATCT GCACCGCAGG CGAAATCGGC GCTCTGCTCC TTGAAGCGCG ATTAATCAAA
GAACAACAGC CGCTGTTTAA TAAACGGTTG CGCCGCAATC GCCAGCTCTG TGCCCTGCAA
TTAAATGAAA AGCGCGTCGA TGTGGTGTAT GCCAAAGAGG TGGATTTTTC ACGAGCCCCC
AACCTGTTTG GCCTGTTTGC CAATAGGCGC GCAGCTTTGC AAGCATTGCA GAGCATCGCT
GATGAACAAA AACTTTGTTA TGGTCTGTTG GGACTGGAAC CGTTAAGTCG CGGTCGTGCG
TGTTTTCGTT CAGCGCTAAA ACGTTGCGCC GGAGCATGCT GCGGTAAAGA GAGCCATGAG
GAACATGCGC TACGCTTGCG CCAGTCTCTG GAGCGTTTGC GGGTGGTGTG TTGGCCTTGG
CAAGGGGCGG TGGCGCTGAA AGAACAGCAC CCGGAAATGA CTCAATATCA TATTATTCAA
AACTGGCTGT GGCTGGGGGC GGTTAATTCG CAGGAAGAAG CGACAACGTT AATTCGGACA
CCCGCCGGGT TTGATCACGA CGGTTATAAA ATTCTTTGTA AGCCGCTGCT TTCCGGTAAC
TATGAAATTA CTGAACTTGA TCCGGCGAAT GACCAGCGAG CCAGTTGA
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| Protein sequence | MVRRLTSPRL EFEAAAIYEY PEHLRSFLND LPTRPGVYLF HGESDTMPLY IGKSVNIRSR
VLSHLRTPDE AAMLRQSRRI SWICTAGEIG ALLLEARLIK EQQPLFNKRL RRNRQLCALQ
LNEKRVDVVY AKEVDFSRAP NLFGLFANRR AALQALQSIA DEQKLCYGLL GLEPLSRGRA
CFRSALKRCA GACCGKESHE EHALRLRQSL ERLRVVCWPW QGAVALKEQH PEMTQYHIIQ
NWLWLGAVNS QEEATTLIRT PAGFDHDGYK ILCKPLLSGN YEITELDPAN DQRAS
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