Gene ECH74115_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2180 
Symbol 
ID6969686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2090430 
End bp2090756 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content56% 
IMG OID643386075 
Producthypothetical protein 
Protein accessionYP_002270564 
Protein GI209398720 
COG category 
COG ID 
TIGRFAM ID[TIGR01560] uncharacterized phage protein (possible DNA packaging) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.000777916 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAGCAT TACTGACACT GGAAGAAATC AAGGCACATC TGCGTGTTGA CCATGACGCG 
GATGATGAGA TGCTGATGGA CAAGGTTCGT CAGGCTACCG CCGTGCTGCT GGCCTACATC
CAGGGCAGCC GGGATAAAGT GATTAGTGAG GACGGTGAGC TGATCCCTGG TGAGGCATTA
ACCCGGATGA AGGGGGCTGC CACGCGACTG ACCGGGATGC TGTACCGGAA TCCGGATCTT
GCTGAGCGGG AAGACCTCGT GCAGGGGGAA CTGCCGTTTT CTGTTTCCGT GCTGATTTAC
GATTTGCGTT GTCCGACGGT GTTATGA
 
Protein sequence
MTALLTLEEI KAHLRVDHDA DDEMLMDKVR QATAVLLAYI QGSRDKVISE DGELIPGEAL 
TRMKGAATRL TGMLYRNPDL AEREDLVQGE LPFSVSVLIY DLRCPTVL