| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1948 |
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| Symbol | pspC |
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| ID | 6969612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1843859 |
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| End bp | 1844218 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643385878 |
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| Product | DNA-binding transcriptional activator PspC |
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| Protein accession | YP_002270367 |
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| Protein GI | 209395915 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGGCA TTAATCTCAA TAAAAAATTA TGGCGTATTC CACAGCAGGG CATGGTCCGT
GGCGTCTGCG CCGGGATTGC CAACTATTTT GATGTACCGG TAAAACTGGT GCGTATCCTG
GTGGTGTTGT CGATTTTCTT CGGTCTGGCG CTGTTTACCC TGGTTGCTTA CATCATTTTG
TCATTTGCGC TTGATCCAAT GCCGGACAAC ATGGCCTTTG GTGAGCAGCT ACCTTCCAGC
AGTGAATTGC TGGATGAAGT CGACCGTGAA CTGGCGGCAA GTGAAACGCG TTTACGCGAG
ATGGAACGTT ATGTCACTTC CGATACATTC ACGTTACGTA GCCGTTTCCG TCAACTGTGA
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| Protein sequence | MAGINLNKKL WRIPQQGMVR GVCAGIANYF DVPVKLVRIL VVLSIFFGLA LFTLVAYIIL
SFALDPMPDN MAFGEQLPSS SELLDEVDRE LAASETRLRE MERYVTSDTF TLRSRFRQL
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