| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1923 |
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| Symbol | rnb |
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| ID | 6967607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1814692 |
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| End bp | 1816626 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643385854 |
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| Product | exoribonuclease II |
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| Protein accession | YP_002270343 |
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| Protein GI | 209396001 |
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| COG category | [K] Transcription |
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| COG ID | [COG4776] Exoribonuclease II |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02062] exoribonuclease II |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0111084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000000153264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTCAGG ACAACCCGCT GCTAGCGCAG CTTAAACAGC AACTGCATTC CCAGACGCCA
CGCGCTGAAG GGGTGGTAAA AGCCACAGAA AAAGGTTTTG GCTTCCTGGA AGTCGACGCG
CAAAAAAGTT ATTTCATTCC GCCGCCGCAG ATGAAAAAAG TCATGCATGG CGACCGAATT
ATCGCGGTGA TCCACAGTGA AAAAGAACGT GAATCCGCAG AGCCAGAAGA ACTGGTTGAA
CCGTTTCTGA CTCGTTTCGT GGGTAAAGTT CAGGGCAAAA ATGACCGTCT GGCCATCGTT
CCTGATCATC CACTCTTAAA AGACGCCATT CCTTGCCGCG CAGCCCGTGG TCTGAACCAC
GAGTTTAAAG AAGGCGACTG GGCAGTTGCC GAAATGCGCC GTCATCCGCT GAAAGGCGAT
CGTTCTTTCT ATGCTGAACT GACACAATAC ATCACTTTTG GTGACGACCA CTTTGTACCG
TGGTGGGTTA CCCTTGCGCG CCATAATCTG GAAAAAGAAG CACCAGACGG CGTCGCTACC
GAAATGCTCG ATGAAGGTCT GGTTCGTAAA GATCTGACCG CGCTGGATTT TGTCACCATC
GACAGTGCCA GCACAGAAGA TATGGATGAC GCCCTTTTCG CTAAGGCGTT GCCGGATGAC
AAACTTCAGC TGATTGTGGC GATTGCCGAT CCAACCGCGT GGATTGCTGA AGGCAGCAAG
CTGGACAAAG CCGCGAAAAT TCGCGCATTC ACCAACTATC TGCCTGGCTT CAACATCCCT
ATGCTGCCTC GCGAGCTTTC TGACGATCTC TGCTCACTGC GCGCCAATGA AGTCCGCCCG
GTACTGGCAT GCCGCATGAC GCTCTCCGCT GATGGCACCA TTGAAGATAA TATCGAATTC
TTTGCCGCCA CCATCGAATC CAAAGCGAAG CTGGTGTATG ACCAGGTTTC TGACTGGCTG
GAGAATACCG GTGACTGGCA GCCTGAAAGT GAAGCAATTG CCGAACAAGT CCGTTTGCTA
GCGCAAATTT GCCAACGCCG CGGCGAGTGG CGTCATAACC ACGCACTGGT GTTTAAAGAT
CGCCCGGATT ACCGCTTTAT TCTCGGTGAA AAAGGTGAAG TGCTGGATAT CGTCGCCGAG
CCTCGTCGCA TTGCCAACCG TATCGTCGAA GAAGCGATGA TTGCCGCTAA CATTTGTGCA
GCTCGCGTAC TGCGCGATAA GCTCGGTTTT GGTATCTATA ACGTGCATAT GGGCTTTGAT
CCGGCGAATG CCGACGCGCT GGCAGCGTTG CTGAAAACGC ACGGTCTGCA TGTCGATGCC
GAAGAAGTGC TCACGCTGGA CGGTTTCTGC AAACTGCGTC GTGAACTGGA TGCGCAACCA
ACTGGTTTCC TCGACAGCCG CATTCGTCGC TTCCAGTCAT TTGCTGAAAT TAGCACTGAA
CCCGGTCCTC ACTTTGGCCT CGGTCTGGAA GCATACGCCA CCTGGACTTC GCCGATCCGT
AAATATGGCG ACATGATCAA CCACCGTCTG CTGAAAGCGG TTATCAAAGG CGAAACTGCG
ACGCGTCCAC AGGATGAAAT CACTGTCCAA ATGGCCGAGC GTCGCCGTCT CAATCGGATG
GCAGAACGTG ATGTTGGTGA CTGGTTATAC GCACGCTTCC TGAAAGACAA AGCCGGGACC
GACACCCGTT TCGCAGCGGA AATTGTCGAT ATCAGCCGTG GCGGCATGCG TGTTCGTTTG
GTTGATAACG GCGCTATCGC CTTTATTCCT GCACCTTTCT TACACGCTGT GCGCGATGAA
CTGGTTTGCA GCCAGGAAAA CGGCACCGTA CAAATTAAAG GTGAAACGGT TTATAAAGTA
ACTGACGTTA TTGACGTCAC CATTGCCGAA GTCCGCATGG AAACCCGCAG CATTATTGCG
CGCCCGGTCG CGTAA
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| Protein sequence | MFQDNPLLAQ LKQQLHSQTP RAEGVVKATE KGFGFLEVDA QKSYFIPPPQ MKKVMHGDRI
IAVIHSEKER ESAEPEELVE PFLTRFVGKV QGKNDRLAIV PDHPLLKDAI PCRAARGLNH
EFKEGDWAVA EMRRHPLKGD RSFYAELTQY ITFGDDHFVP WWVTLARHNL EKEAPDGVAT
EMLDEGLVRK DLTALDFVTI DSASTEDMDD ALFAKALPDD KLQLIVAIAD PTAWIAEGSK
LDKAAKIRAF TNYLPGFNIP MLPRELSDDL CSLRANEVRP VLACRMTLSA DGTIEDNIEF
FAATIESKAK LVYDQVSDWL ENTGDWQPES EAIAEQVRLL AQICQRRGEW RHNHALVFKD
RPDYRFILGE KGEVLDIVAE PRRIANRIVE EAMIAANICA ARVLRDKLGF GIYNVHMGFD
PANADALAAL LKTHGLHVDA EEVLTLDGFC KLRRELDAQP TGFLDSRIRR FQSFAEISTE
PGPHFGLGLE AYATWTSPIR KYGDMINHRL LKAVIKGETA TRPQDEITVQ MAERRRLNRM
AERDVGDWLY ARFLKDKAGT DTRFAAEIVD ISRGGMRVRL VDNGAIAFIP APFLHAVRDE
LVCSQENGTV QIKGETVYKV TDVIDVTIAE VRMETRSIIA RPVA
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