| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1892 |
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| Symbol | trpA |
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| ID | 6972001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1784450 |
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| End bp | 1785256 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643385826 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_002270315 |
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| Protein GI | 209400034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00584343 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACGCT ACGAATCTCT GTTTGCCCAG TTGAAGGAGC GCAAAGAAGG CGCATTCGTT
CCTTTCGTCA CGCTCGGTGA TCCGGGCATT GAGCAGTCGC TGAAAATTAT CGATACGCTA
ATTGAAGCCG GTGCTGACAC GCTGGAGTTA GGCATCCCCT TCTCCGACCC ACTGGCAGAT
GGCCCGACGA TTCAAAACGC CACACTGCGT GCCTTTGCGG CAGGTGTGAC CCCGGCGCAG
TGCTTTGAGA TGCTGGCACT CATTCGCCAG AAACACCCGA CCATTCCCAT TGGCCTGCTG
ATGTATGCCA ACCTGGTGTT TAACAAAGGC ATTGATGAGT TTTATGCCCA GTGCGAGAAA
GTCGGCGTCG ATTCGGTGCT GGTTGCCGAT GTGCCAGTTG AAGAGTCCGC GCCCTTCCGC
CAGGCCGCGT TGCGTCATAA TGTCGCACCT ATCTTCATCT GCCCGCCAAA TGCCGATGAC
GACCTGCTGC GCCAGATAGC CTCTTACGGT CGTGGTTACA CATATTTGCT GTCACGAGCG
GGCGTGACCG GCGCAGAAAA CCGCGCCGCG TTACCCCTCA ATCATCTGGT TGCGAAGCTG
AAAGAGTACA ACGCGGCACC TCCATTGCAG GGATTTGGTA TTTCCGCCCC GGATCAGGTA
AAAGCAGCGA TTGATGCAGG AGCTGCGGGC GCGATTTCTG GTTCTGCGAT TGTTAAAATC
ATCGAGCAAC ATATTAATGA GCCAAAGAAA ATGCTGGCGG CACTGAAAGC TTTTGTACAA
CCGATGAAAG CGGCGACGCG CAGTTAA
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| Protein sequence | MERYESLFAQ LKERKEGAFV PFVTLGDPGI EQSLKIIDTL IEAGADTLEL GIPFSDPLAD
GPTIQNATLR AFAAGVTPAQ CFEMLALIRQ KHPTIPIGLL MYANLVFNKG IDEFYAQCEK
VGVDSVLVAD VPVEESAPFR QAALRHNVAP IFICPPNADD DLLRQIASYG RGYTYLLSRA
GVTGAENRAA LPLNHLVAKL KEYNAAPPLQ GFGISAPDQV KAAIDAGAAG AISGSAIVKI
IEQHINEPKK MLAALKAFVQ PMKAATRS
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