Gene ECH74115_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1630 
Symbol 
ID6969676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1575518 
End bp1576258 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content58% 
IMG OID643385590 
Productmajor tail protein V 
Protein accessionYP_002270084 
Protein GI209397999 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0416885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAC CAAATCCTCT GGCACCGGTG AAAGGGGCCG GGACCACACT GTGGGTTTAT 
AACGGGAACG GCGACCCATA TGCAAACCCG CTTTCAGACA ATGACTGGTC GCGTCTGGCA
AAGGTTAAAG ACCTGACGCC CGGCGAACTG ACCGCTGAGT CCTATGACGA CAGTTATCTC
GATGATGAAG ATGCGGACTG GGCCGCGACC GGACAGGGGC AGAAATCCGC TGGAGATACC
AGCTTCACGC TGGCGTGGAT GCCCGGAGAG CAGGGGCAGC AGGCGCTGCT GGCGTGGTTT
AATGAAGGTG ATACCCGTGC CTATAAAATC CGCTTCCCGA ACGGCACGGT CGATGTGTTC
CGCGGCTGGG TCAGCAGTAT CGGTAAGGCG GTGACGGCGA AGGAAGTGAT CACCCGCACG
GTGAAAGTCA CCAACGTGGG ACGTCCGTCG ATGGCAGAAG ATCGCAGCAC GGTAACAGCG
GCAACCGGCA TGACCGTGAC GCCTGCCAGC ACCTCGGTGG TGAAAGGGCA GAGCACGACG
CTGACCGTGG CATTCCAGCC GGAAGGCGCA ACCGACAAGA GCTTCCGTGC GGTGTCTGCG
GATAAAACAA AAGCCACCGT GTCGGTCAGT GGTATGACCA TCACCGTGAA AGGTGTTGCT
GCAGGCAAGG TCAACATTCC GGTCGTATCC GGTAATGGTG AGTTTGCTGC GGTTGCAGAA
ATCAACGTCA CCGCCAGTTA A
 
Protein sequence
MPTPNPLAPV KGAGTTLWVY NGNGDPYANP LSDNDWSRLA KVKDLTPGEL TAESYDDSYL 
DDEDADWAAT GQGQKSAGDT SFTLAWMPGE QGQQALLAWF NEGDTRAYKI RFPNGTVDVF
RGWVSSIGKA VTAKEVITRT VKVTNVGRPS MAEDRSTVTA ATGMTVTPAS TSVVKGQSTT
LTVAFQPEGA TDKSFRAVSA DKTKATVSVS GMTITVKGVA AGKVNIPVVS GNGEFAAVAE
INVTAS