Gene ECH74115_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1551 
Symbol 
ID6968687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1516626 
End bp1517324 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content58% 
IMG OID643385519 
Productphage minor tail protein L 
Protein accessionYP_002270013 
Protein GI209398837 
COG category[S] Function unknown 
COG ID[COG4672] Phage-related protein 
TIGRFAM ID[TIGR01600] lambda-like phage minor tail protein L 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0120682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00403336 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGACA TTCATGAAGA AAGTCTGAAC GAGTCGGTTA AATCAGAGCA GTCACCGCGG 
GTGGTGCTCT GGGAAATTGA CCTGACGGTG CAGGGCGGTG AGCGGTATTT TTTCTGTAAT
GAGCTGAATG AAAAAGGGGA GGCGGTCACC TGGCAGGGGC GGCAATATCA GGTATACCCG
ATTGACGGCA GTGGCTTTGA GATGAACGGG AAGGGCAGCA GTGCCCGCCC GTCGCTGACG
GTGTCGAATC TGTTCGGTCT GGTCACCGGA ATGGCGGAGG ACCTGCAGAG CCTGGTGGGG
GCCACGGTGG TCCGCCGCCG GGTGTATGCC CGTTTTCTGG ATGCGGTGAA TTTTGTGGCG
GGCAATCCGG AAGCGGACCC GGAGCAGGAG CTGAGAGACC GCTGGGTGGT GGAGCAGATG
TCAGAGCTGA CGGCCATGAC AGCCTCGTTT GTGCTGGCAA CACCGACGGA GACGGACGGA
GCGCTGTTTC CCGGTCGCAT CATGCTGGCG AACACCTGTA TGTGGGATTA CCGGGGAGAT
GAATGCGGTT ATCACGGTCC TGCGGTGGCG GATGAGTTCG ACAACCCCAC CACGGATATC
CGTAAGGACA GATGCAGCAA GTGCATGCGC GGGTGTGAGA TGCGCGGCAT GGTGGCTAAT
TTTGGCGGTT TCCTTTCCAT TAATAAACTT TCGCAGTAA
 
Protein sequence
MQDIHEESLN ESVKSEQSPR VVLWEIDLTV QGGERYFFCN ELNEKGEAVT WQGRQYQVYP 
IDGSGFEMNG KGSSARPSLT VSNLFGLVTG MAEDLQSLVG ATVVRRRVYA RFLDAVNFVA
GNPEADPEQE LRDRWVVEQM SELTAMTASF VLATPTETDG ALFPGRIMLA NTCMWDYRGD
ECGYHGPAVA DEFDNPTTDI RKDRCSKCMR GCEMRGMVAN FGGFLSINKL SQ