Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1551 |
Symbol | |
ID | 6968687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1516626 |
End bp | 1517324 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643385519 |
Product | phage minor tail protein L |
Protein accession | YP_002270013 |
Protein GI | 209398837 |
COG category | [S] Function unknown |
COG ID | [COG4672] Phage-related protein |
TIGRFAM ID | [TIGR01600] lambda-like phage minor tail protein L |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0120682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00403336 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGGACA TTCATGAAGA AAGTCTGAAC GAGTCGGTTA AATCAGAGCA GTCACCGCGG GTGGTGCTCT GGGAAATTGA CCTGACGGTG CAGGGCGGTG AGCGGTATTT TTTCTGTAAT GAGCTGAATG AAAAAGGGGA GGCGGTCACC TGGCAGGGGC GGCAATATCA GGTATACCCG ATTGACGGCA GTGGCTTTGA GATGAACGGG AAGGGCAGCA GTGCCCGCCC GTCGCTGACG GTGTCGAATC TGTTCGGTCT GGTCACCGGA ATGGCGGAGG ACCTGCAGAG CCTGGTGGGG GCCACGGTGG TCCGCCGCCG GGTGTATGCC CGTTTTCTGG ATGCGGTGAA TTTTGTGGCG GGCAATCCGG AAGCGGACCC GGAGCAGGAG CTGAGAGACC GCTGGGTGGT GGAGCAGATG TCAGAGCTGA CGGCCATGAC AGCCTCGTTT GTGCTGGCAA CACCGACGGA GACGGACGGA GCGCTGTTTC CCGGTCGCAT CATGCTGGCG AACACCTGTA TGTGGGATTA CCGGGGAGAT GAATGCGGTT ATCACGGTCC TGCGGTGGCG GATGAGTTCG ACAACCCCAC CACGGATATC CGTAAGGACA GATGCAGCAA GTGCATGCGC GGGTGTGAGA TGCGCGGCAT GGTGGCTAAT TTTGGCGGTT TCCTTTCCAT TAATAAACTT TCGCAGTAA
|
Protein sequence | MQDIHEESLN ESVKSEQSPR VVLWEIDLTV QGGERYFFCN ELNEKGEAVT WQGRQYQVYP IDGSGFEMNG KGSSARPSLT VSNLFGLVTG MAEDLQSLVG ATVVRRRVYA RFLDAVNFVA GNPEADPEQE LRDRWVVEQM SELTAMTASF VLATPTETDG ALFPGRIMLA NTCMWDYRGD ECGYHGPAVA DEFDNPTTDI RKDRCSKCMR GCEMRGMVAN FGGFLSINKL SQ
|
| |