| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1484 |
|---|
| Symbol | |
|---|
| ID | 6969607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1464945 |
|---|
| End bp | 1465322 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643385455 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_002269949 |
|---|
| Protein GI | 209399279 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5633] Predicted periplasmic lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.677422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0000606348 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAG GATGCTTTGG GCTGGTGTCT CTGGCGTTGT TACTGCTGGT GGGCTGTCGT
TCACATCCGG AAATTCCGGT GAATGATGAG CAATCGCTGG TGATGGAGTC ATCTTTATTG
GCTGCGGGCA TCAGTGCAGA AAAGCCCGTC CTTTCGACGT CTGATATTCA ACCTTCAGCA
TCCTCAACGC TTTATAACGA AAGGCAAGAA CCCGTTACCG TTCATTATCG TTTTTACTGG
TATGACGCCA GAGGGCTGGA GATGCATCCT CTGGAAAGGC CACGCAGCGT TACCATTCCC
GCACATTCGG CGGTAACGCT GTACGGCAGC GCCAATTTTC TGGGGGCGCA CAAAGTCAGA
CTTTATCTAT ATTTGTAA
|
|---|
| Protein sequence | MRKGCFGLVS LALLLLVGCR SHPEIPVNDE QSLVMESSLL AAGISAEKPV LSTSDIQPSA
SSTLYNERQE PVTVHYRFYW YDARGLEMHP LERPRSVTIP AHSAVTLYGS ANFLGAHKVR
LYLYL
|
|---|
| |