| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1266 |
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| Symbol | pgaA |
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| ID | 6968718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1275095 |
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| End bp | 1277518 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643385256 |
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| Product | outer membrane protein PgaA |
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| Protein accession | YP_002269751 |
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| Protein GI | 209397134 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.632553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCAA GTAGCAGAAA AAGGTGCCCG AAAACCAAAT GGGCTTTGAA ACTTCTTACT
GCCGCATTTT TAGCAGCGAG TCCCGCGGCG AAGAGTGCTG TTAATAACGC CTATGATGCA
TTGATTATTG AAGCTCGCAA GGGTAATACT CAGCCAGCTT TGTCATGGTT TGCACTAAAA
TCAGCACTCA GCAATAACCA AATTGCTGAC TGGTTACAGA TTGCCTTATG GGCCGGGCAA
GATAAACAGG TTATTACCGT TTACAACCGC TACCGTCATC AGCAATTACC AGCGCGTGGT
TATGCAGCTG TCGCCGTCGC TTATCGTAAC CTGCAACAAT GGCAAAACTC GCTTACACTG
TGGCAAAAGG CGCTCTCTCT GGAGCCGCAA AATAAGGATT ATCAACGGGG ACAAATTTTA
ACCCTGGCAG ATGCTGGTCA CTATGATACT GCGCTGGTTA AACTTAAGCA GCTTAACTCT
GGAGCACCGG ACAAAGCCAA TTTACTCGCA GAAGCCTATA TCTATAAACT GGCGGGGCGT
CATCAGGATG AATTACGGGC GATGACAGAG TCATTACCTG AAAATGCATC TACGCAACAA
TATCCCACAG AATACGTGCA GGCATTACGT AATAATCAAC TTGCTGCCGC GATTGACGAT
GCCAATTTAA CGCCAGATAT TCGCGCTGAT ATTCATGCCG AACTGGTCAG ACTGTCGTTT
ATGCCTACGC GCAGTGAAAG TGAACGTTAT GCCATTGCCG ATCGCGCCCT CGCCCAATAC
GCTGCATTAG AAATTCTGTG GCACGATAAC CCAGACCGTA CTGCCCAGTA CCAGCGTATT
CAGGTTGATC ATCTTGGCGC GTTATTAACT CGCGATCGTT ATAAAGACGT TATTTCTCAC
TATCAGCGAT TAAAAAAGAC GGGGCAAATT ATTCCGCCCT GGGGGCAATA TTGGGTTGCA
TCGGCTTATC TCAAAGATCA TCAGCCGAAA AAAGCACAGT CAATAATGAC CGAGCTCTTT
TATCACAAGG AGACCATTGC CCCGGATTTA TCCGATGAAG AACTTGCGGA TCTCTTTTAC
AGCCACCTGG AGAGTGAAAA TTATCCGGGC GCGCTAACTG TCACCCAACA TACCATTAAT
ACTTCGCCGC CTTTCCTTCG GTTAATGGGC ACGCCTACGA GCATCCCGAA TGATACCTGG
TTACAGGGGC ATTCGTTTCT CTCAACCGTA GCAAAATATA GTAATGATCT TCCTCAGGCT
GAAATGACAG CCAGAGAGCT TGCTTATAAC GCACCAGGAA ATCAGGGACT GCGCATTGAT
TACGCGAGTG TGTTACAAGC CCGCGGTTGG CCTCGTGCAG CAGAAAATGA ATTAAAAAAA
GCAGAAGTGA TCGAGCCACG TAATATTAAT CTGGAGGTTG AACAAGCCTG GACAGCATTA
ACGTTACAAG AATGGCAGCA GGCAGCTGTC TTAACGCACG ATGTTGTCGA ACGTGAACCG
CAAGATCCCG GCGTTGTACG ATTAAAACGT GCGGTTGATG TACATAATCT TGCAGAGCTT
CGTATCGCTG GCTCAACAGG AATTGATGCC GAAGGCCCGG ATAGTGGTAA ACATGATGTC
GACTTAACCA CCATCGTTTA TTCACCACCG CTGAAGGATA ACTGGCGCGG TTTTGCTGGA
TTCGGTTATG CCGATGGACA ATTTAGCGAA GGAAAAGGGA TTGTTCGCGA CTGGCTTGCG
GGTGTTGAGT GGCGGTCACG TAATATCTGG CTCGAGGCAG AGTACGCTGA ACGCGTTTTC
AATCATGAGC ATAAACCCGG CGCGCGCCTG TCTGGCTGGT ATGATTTTAA TGATAACTGG
CGTATTGGTT CGCAACTGGA ACGCCTCTCT CACCGCGTTC CATTACGGGC AATGAAAAAT
GGTGTTACAG GCAACAGTGC TCAGGCTTAT GTTCGCTGGT ATCAAAATGA GCGGCGTAAG
TACGGTGTCT CCTGGGCTTT CACTGATTTT TCCGACAGTA ACCAGCGTCA TGAAGTCTCA
CTTGAGGGTC AGGAACGCAT CTGGTCTTCA CCATATTTGA TTGTCGATTT CCTACCCAGT
CTGTATTACG AACAAAATAC AGAACACGAT ACCCCATACT ACAACCCTAT AAAAACGTTC
GATATTGTTC CGGCATTTGA GGCAAGCCAT TTGTTATGGC GAAGCTATGA AAATAGCTGG
GAGCAAATAT TCAGCGCAGG TGTTGGTGCC TCCTGGCAAA AACATTATGG CACGGATGTC
GTCACCCAAC TCGGCTACGG GCAACGCATT AGCTGGAATG ACGTGATTGA TGCTGGCGCA
ACGCTACGCT GGGAAAAACG ACCTTATGAC GGTGACAGAG AACACAACTT ATACGTTGAA
TTCGATATGA CATTCAGATT TTAA
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| Protein sequence | MYSSSRKRCP KTKWALKLLT AAFLAASPAA KSAVNNAYDA LIIEARKGNT QPALSWFALK
SALSNNQIAD WLQIALWAGQ DKQVITVYNR YRHQQLPARG YAAVAVAYRN LQQWQNSLTL
WQKALSLEPQ NKDYQRGQIL TLADAGHYDT ALVKLKQLNS GAPDKANLLA EAYIYKLAGR
HQDELRAMTE SLPENASTQQ YPTEYVQALR NNQLAAAIDD ANLTPDIRAD IHAELVRLSF
MPTRSESERY AIADRALAQY AALEILWHDN PDRTAQYQRI QVDHLGALLT RDRYKDVISH
YQRLKKTGQI IPPWGQYWVA SAYLKDHQPK KAQSIMTELF YHKETIAPDL SDEELADLFY
SHLESENYPG ALTVTQHTIN TSPPFLRLMG TPTSIPNDTW LQGHSFLSTV AKYSNDLPQA
EMTARELAYN APGNQGLRID YASVLQARGW PRAAENELKK AEVIEPRNIN LEVEQAWTAL
TLQEWQQAAV LTHDVVEREP QDPGVVRLKR AVDVHNLAEL RIAGSTGIDA EGPDSGKHDV
DLTTIVYSPP LKDNWRGFAG FGYADGQFSE GKGIVRDWLA GVEWRSRNIW LEAEYAERVF
NHEHKPGARL SGWYDFNDNW RIGSQLERLS HRVPLRAMKN GVTGNSAQAY VRWYQNERRK
YGVSWAFTDF SDSNQRHEVS LEGQERIWSS PYLIVDFLPS LYYEQNTEHD TPYYNPIKTF
DIVPAFEASH LLWRSYENSW EQIFSAGVGA SWQKHYGTDV VTQLGYGQRI SWNDVIDAGA
TLRWEKRPYD GDREHNLYVE FDMTFRF
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