Gene ECH74115_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1061 
Symbol 
ID6968758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1080341 
End bp1081489 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID643385073 
Productputative MFS family transporter protein 
Protein accessionYP_002269572 
Protein GI209397044 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGT ATACCCGGCC TGTCATGCTT TTGCTGTCTG GCCTGCTTTT GTTGACTCTG 
GCGATCGCGG TGTTAAATAC ACTCGTGCCG CTTTGGCTCG CCCAGGAACA CATGTCCACA
TGGCAGGTAG GCGTTGTCAG CTCATCCTAT TTTACCGGCA ACCTTGTCGG TACATTGCTG
ACAGGGTATG TCATTAAACG CATTGGCTTT AACCGCAGCT ATTATCTGGC CTCCTTCATT
TTTGCCGCTG GCTGTGCCGG CCTTGGCCTG ATGATTGGTT TCTGGAGCTG GTTGGCGTGG
CGTTTTGTCG CGGGCGTCGG CTGTGCCATG ATTTGGGTAG TCGTTGAGAG CGCGCTGATG
TGCAGTGGGA CGTCACGTAA CCGTGGGCGT TTGCTTGCTG CGTATATGAT GGTTTATTAC
GTGGGAACAT TTTTAGGCCA GTTACTGGTC AGCAAAGTCT CAACCGAGCT GATGAGCGTA
TTGCCGTGGG TTACAGGTTT GACGTTGGCA GGGATCTTAC CGCTGTTGTT TACGCGTGTC
CTGAATCAGC AGGCTGAAAA CCATGATTCG ACGTCAATTA CGTCAATGCT AAAACTCCGT
CAGGCGCGGC TTGGCGTGAA TGGCTGCATT ATCTCAGGAA TCGTGCTGGG ATCTCTATAT
GGCCTGATGC CGCTGTACCT CAATCACAAA GGGGTGAGCA ATGCCAGCAT TGGTTTCTGG
ATGGCGGTAC TGGTCAGTGC GGGTATCCTC GGACAATGGC CGATTGGACG TCTGGCGGAT
AAGTTTGGTC GACTGCTGGT GTTGCGTGTT CAGGTCTTTG TCGTCATTCT CGGCAGTATC
GCGATGCTTA GCCAGGCGGC GATGGCCCCA GCGTTATTCA TCCTCGGTGC CGCTGGCTTT
ACGCTATATC CGGTGGCGAT GGCCTGGGCT TGTGAGAAAG TTGAACATCA TCAACTGGTG
GCGATGAACC AGGCCTTACT GTTGAGCTAT ACCGTGGGAA GTCTGCTTGG CCCGTCATTT
ACCGCTATGC TAATGCAGAA TTTCTCCGAT AATTTATTGT TTATCATGAT CGCCAGCGTA
TCGTTTATCT ATTTGCTGAT GCTGCTTCGC AACGCCGGTC ATACGCCGAA ACCCGTTGCT
CACGTGTAA
 
Protein sequence
MSTYTRPVML LLSGLLLLTL AIAVLNTLVP LWLAQEHMST WQVGVVSSSY FTGNLVGTLL 
TGYVIKRIGF NRSYYLASFI FAAGCAGLGL MIGFWSWLAW RFVAGVGCAM IWVVVESALM
CSGTSRNRGR LLAAYMMVYY VGTFLGQLLV SKVSTELMSV LPWVTGLTLA GILPLLFTRV
LNQQAENHDS TSITSMLKLR QARLGVNGCI ISGIVLGSLY GLMPLYLNHK GVSNASIGFW
MAVLVSAGIL GQWPIGRLAD KFGRLLVLRV QVFVVILGSI AMLSQAAMAP ALFILGAAGF
TLYPVAMAWA CEKVEHHQLV AMNQALLLSY TVGSLLGPSF TAMLMQNFSD NLLFIMIASV
SFIYLLMLLR NAGHTPKPVA HV