Gene ECH74115_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1054 
Symbol 
ID6968898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1072462 
End bp1073805 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content53% 
IMG OID643385066 
Productrecombination factor protein RarA 
Protein accessionYP_002269565 
Protein GI209397045 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0434989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAATC TGTCGCTCGA TTTTTCGGAT AATACTTTTC AACCTCTGGC CGCGCGTATG 
CGGCCAGAAA ATTTAGCACA GTATATCGGT CAGCAACATT TGCTGGCTGC GGGGAAGCCG
TTGCCGCGCG CTATCGAAGC CGGGCATTTA CATTCTATGA TCCTCTGGGG GCCACCGGGT
ACCGGCAAAA CAACCCTCGC TGAAGTGATT GCCCGCTATG CGAACGCTGA TGTGGAACGT
ATTTCTGCCG TCACCTCTGG TGTGAAAGAG ATTCGCGAGG CGATCGAGCG CGCCCGGCAA
AACCGCAATG CAGGTCGCCG CACTATTCTT TTTGTTGACG AAGTTCACCG TTTCAACAAA
AGCCAGCAGG ATGCATTTCT GCCACATATT GAAGACGGCA CCATCACTTT TATTGGCGCA
ACCACTGAAA ACCCGTCGTT TGAGCTTAAT TCGGCACTGC TTTCCCGTGC CCGTGTTTAT
CTGTTGAAAT CCCTGAGTAC AGAGGATATT GAGCAAGTAC TAACTCAGGC GATGGAAGAC
AAAACCCGTG GCTATGGTGG TCAGGATATT GTTCTGCCAG ATGAAACACG ACGTGCCATT
GCAGAACTGG TGAATGGCGA CGCGCGCCGG GCGTTAAATA CGCTGGAAAT GATGGCGGAT
ATGGCCGAAG TCGATGATAG CGGTAAGCGG GTCCTGAAGC CTGAATTACT GACCGAAATC
GCCGGTGAAC GTAGCGCCCG CTTTGATAAC AAAGGCGATC GCTTTTACGA TCTGATTTCC
GCACTGCATA AGTCGGTACG TGGTAGCGCA CCCGATGCGG CGCTGTACTG GTATGCGCGA
ATTATTACCG CTGGTGGCGA TCCGTTATAT GTCGCGCGTC GCTGTCTGGC GATTGCGTCT
GAAGACGTCG GTAATGCCGA TCCACGGGCG ATGCAGGTGG CAATTGCGGC CTGGGATTGC
TTTACTCGCG TTGGCCCGGC GGAAGGTGAA CGCGCCATTG CTCAGGCGAT TGTTTACCTG
GCCTGCGCGC CAAAAAGCAA CGCTGTCTAC ACTGCGTTTA AAGCCGCGCT GGCCGATGCT
CGCGAACGCC CGGATTATGA CGTGCCGGTT CATTTGCGTA ATGCGCCGAC GAAATTAATG
AAGGAAATGG GCTACGGGCA GGAATATCGT TACGCTCATG ATGAAGCAAA CGCTTATGCT
GCCGGTGAGG TTTACTTCCC GCCGGAAATA GCACAAACAC GCTATTATTT CCCGACAAAC
AGGGGCCTTG AAGGCAAGAT TGGCGAAAAG CTCGCCTGGC TGGCTGAACA GGATCAAAAT
AGCCCCATAA AACGCTACCG TTAA
 
Protein sequence
MSNLSLDFSD NTFQPLAARM RPENLAQYIG QQHLLAAGKP LPRAIEAGHL HSMILWGPPG 
TGKTTLAEVI ARYANADVER ISAVTSGVKE IREAIERARQ NRNAGRRTIL FVDEVHRFNK
SQQDAFLPHI EDGTITFIGA TTENPSFELN SALLSRARVY LLKSLSTEDI EQVLTQAMED
KTRGYGGQDI VLPDETRRAI AELVNGDARR ALNTLEMMAD MAEVDDSGKR VLKPELLTEI
AGERSARFDN KGDRFYDLIS ALHKSVRGSA PDAALYWYAR IITAGGDPLY VARRCLAIAS
EDVGNADPRA MQVAIAAWDC FTRVGPAEGE RAIAQAIVYL ACAPKSNAVY TAFKAALADA
RERPDYDVPV HLRNAPTKLM KEMGYGQEYR YAHDEANAYA AGEVYFPPEI AQTRYYFPTN
RGLEGKIGEK LAWLAEQDQN SPIKRYR