Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0823 |
Symbol | |
ID | 6967595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 845451 |
End bp | 846356 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643384848 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002269354 |
Protein GI | 209396424 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGGGA AAATACCTAA AACGGAACTG CTGGTGACTT TTGAGGTCGT CGCACGTCAT GAAAGTTATA CCAGAGCGGC AGAGGAGTTA GCGTTAACCC AAAGTGCAGT ATTCAGACAA GTAAGTGCGC TGGAGGAATT TTTACGTACT CCGTTATTTT CACACTCTAA AAAACGCATT TTTCTTAATG ATACAGGGAA GTATTACCTG GGGATAGTAA AAGAAACATT AAATAAGCTG GAACGCGATA CCAATACCAT TATGACCTGG CAGCCTACGG TTCAGGTTAT TGAACTTGCC GTTAATCCTA CTTTTAGTAC CCACTGGTTA ATCCCAAATT TACATGAATT CACAAAGTTA CATCCCGATA TTATTGTTAA TATTCATTCT TTAGCTAATA ACGGCGATTT TCTTAATCGG GAGTACGATG CTGTCATTAT GCGCGAAAAT TTTTGCGCGC CCTGGGCGGA AGTAGAATAT CTCTTTGAAG AGGAGATTTT GCCGGTATGC AGCGGCAGTT TGCTTGCAAT GTCCGATCAA AAACTGTCAG TGGCAGAACT GCTTACTGAG TTACCACTTC TGCATCAAAG CACCCGTATT ACTGGCTGGG AAGAGTGGTT TGCTTTATCT GGCGTTAGCA GTCCGCTGGT CAACAACGGA CCACGTTTCG ATTTGCTTTC AATGCTGATT GCCGCCGTGC GCTCTAATCT CGGCGTGGCG CTGTTACCAC GTTTCGCTAT TCAACATGAT TTGGATAGTG GCGATATGGT GATTCCCTGT GATGTGCCTA TTCGTACCGG TAATCGTTTT ATTATGACGT GGCAGGAAGA GAAGTCTGAC TCACCGCACT TGCAGCAATT TCGTGAATGG TTGCTGGCGA AATCGGTCGT ACCGCAGGAG ATGTAA
|
Protein sequence | MRGKIPKTEL LVTFEVVARH ESYTRAAEEL ALTQSAVFRQ VSALEEFLRT PLFSHSKKRI FLNDTGKYYL GIVKETLNKL ERDTNTIMTW QPTVQVIELA VNPTFSTHWL IPNLHEFTKL HPDIIVNIHS LANNGDFLNR EYDAVIMREN FCAPWAEVEY LFEEEILPVC SGSLLAMSDQ KLSVAELLTE LPLLHQSTRI TGWEEWFALS GVSSPLVNNG PRFDLLSMLI AAVRSNLGVA LLPRFAIQHD LDSGDMVIPC DVPIRTGNRF IMTWQEEKSD SPHLQQFREW LLAKSVVPQE M
|
| |