Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0579 |
Symbol | |
ID | 6968223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 581851 |
End bp | 583143 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643384623 |
Product | amino acid permease family protein |
Protein accession | YP_002269137 |
Protein GI | 209397350 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACA CGGAAGGTAA TAACGGTAAC AAACCCCTCG GTCTATGGAA CGTCGTTTCC ATCGGCATTG GGGCAATGGT GGGGGCGGGG ATCTTCGCGC TGCTGGGGCA GGCTGCGTTG CTAATGGAAG CCTCGACCTG GGTCGCCTTT GCTTTTGGCG GTATTGTGGC GATGTTTTCC GGTTATGCCT ATGCGCGTCT GGGGGCGAGC TATCCCAGCA ATGGCGGCAT TATCGACTTC TTTCGTCGCG GATTAGGCAA CGGCGTCTTT TCGCTGGCGC TCTCGTTACT GTACCTGTTG ACGCTGGCGG TGAGCATCGC CATGGTCGCC CGTGCTTTTG GCGCTTATGC CGTGCAGTTT TTGCATGAAG GCAGCCAGGA GGAGCACCTT ATTTTGCTCT ACGCGTTGGG GATCATTGCG GTGATGACGC TTTTCAACTC CTTAAGCAAC CATGCGGTAG GGCGGCTGGA GGTGATCCTC GTCGGCATTA AAATGATGAT CCTGTTATTG CTGATTATTG CCGGTGTCTG GTCGCTGCAA CCGGCGCATA TTTCCGTCTC TGCGCCCCCC AGCTCCGGTG CGTTCTTCTC CTGTATCGGG ATAACCTTCC TTGCCTATGC GGGCTTTGGC ATGATGGCGA ACGCGGCGGA TAAAGTGAAA GATCCGCAGG TCATTATGCC ACGGGCGTTT CTGGTGGCAA TTGGCGTTAC CACGTTGCTT TATATCTCGC TGGCGCTGGT TTTGCTTAGC GATGTATCGG CATTAGAGTT AGAAAAATAT GCCGATACCG CCGTAGCGCA GGCTGCTTCT CCGCTGCTCG GGCATGTGGG TTATGTGATC GTCGTCATCG GCGCTTTACT GGCGACGGCT TCAGCCATCA ACGCGAACCT GTTCGCCGTG TTTAACATCA TGGACAACAT GGGCAGCGAA CGCGAACTGC CGAAGCTAAT GAATAAATCC CTGTGGCGGC AGAGTACCTG GGGCAACATC ATTGTCGTGG TGTTGATTAT GCTGATGACG GCGGCACTAA ATTTAGGCTC ACTCGCCAGC GTTGCCAGCG CCACCTTTTT GATTTGCTAT CTGGCGGTGT TTGTGGTGGC GATCCGCCTG CGTCATGATA TTCACGCCTC GTTGCCGATT CTTATCGTAG GTACGTTGGT GATGTTGTTG GTGATCGTTG GCTTTATCTA CAGCCTGTGG TCCCAGGGCA GCCGTGCGTT GATATGGATT ATTGGTGCAA TCTTACTCAG CCTTATTGTG GCAATGGTCA TGAAGCGCAA TAAAACCGTA TAA
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Protein sequence | MMNTEGNNGN KPLGLWNVVS IGIGAMVGAG IFALLGQAAL LMEASTWVAF AFGGIVAMFS GYAYARLGAS YPSNGGIIDF FRRGLGNGVF SLALSLLYLL TLAVSIAMVA RAFGAYAVQF LHEGSQEEHL ILLYALGIIA VMTLFNSLSN HAVGRLEVIL VGIKMMILLL LIIAGVWSLQ PAHISVSAPP SSGAFFSCIG ITFLAYAGFG MMANAADKVK DPQVIMPRAF LVAIGVTTLL YISLALVLLS DVSALELEKY ADTAVAQAAS PLLGHVGYVI VVIGALLATA SAINANLFAV FNIMDNMGSE RELPKLMNKS LWRQSTWGNI IVVVLIMLMT AALNLGSLAS VASATFLICY LAVFVVAIRL RHDIHASLPI LIVGTLVMLL VIVGFIYSLW SQGSRALIWI IGAILLSLIV AMVMKRNKTV
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