Gene ECH74115_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0304 
Symbol 
ID6969299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp312981 
End bp313724 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content35% 
IMG OID643384369 
Productputative transcription regulator 
Protein accessionYP_002268884 
Protein GI209399437 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.569536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA CATGTTCAGT TATATTGATT TTGGAGTCCT TTGATGTTTA TTTCGGAAAA 
GAGAGTGTGT TTCTGGAGAG AGGTTCATCT GTACTTGTCG ACTCTAGCTC TAGAGATTTT
TTCCTGACAT ATCCTGAAAG AGTGATAGTG GCGGATTTTG GCGCTGAGTT TATTAGTCGC
TATTTGAAAG CTAATAACTT AAGGGATATT TCTGATTGTA GGGAATATCC ATCTTATTTA
AAAATAAACT TTGCTGACTT CAGTTTAATT AAAGGATTAA TTAGTTGGGC TAATCACTGT
GCTGAATACA TAGAAATTTT TGATGAGTCT ATTGCTTTTA CATGTCTCTC TGCATTTTCT
TCTGAAAAAC AATTTGGAGT ATTTCTGTTT GGATGTTTGA AAAGCACAGG GGCTAAAGTT
AAAACGATTA TTCATACGGA TTTATCTGCA CCATGGCGTC TTAAGGATAT ATCATCAAGA
TTATATCTCA GCGAAAGTTT ACTAAAGAGG AAATTGAAAG AAGAGGGGGT ATCATTCAGT
AAGATCATAC TTGATGAGAG GATGCAAATG GCTGAATATT TACTCAGCAC TCGTTGTTAT
CCTATTAGTA AAGTAGCTAA GGTCTGTGGT TATGCCAGTG TCTCATACTT TACTTATGTA
TTTAGACGTT ATTTTGGTGT TTCTCCAAGT CAATACTCTC AGAGGAGTTC AGAAAGTAAA
ATTCTTACTC ACCAGGGAAT CTGA
 
Protein sequence
MATTCSVILI LESFDVYFGK ESVFLERGSS VLVDSSSRDF FLTYPERVIV ADFGAEFISR 
YLKANNLRDI SDCREYPSYL KINFADFSLI KGLISWANHC AEYIEIFDES IAFTCLSAFS
SEKQFGVFLF GCLKSTGAKV KTIIHTDLSA PWRLKDISSR LYLSESLLKR KLKEEGVSFS
KIILDERMQM AEYLLSTRCY PISKVAKVCG YASVSYFTYV FRRYFGVSPS QYSQRSSESK
ILTHQGI