| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0124 |
|---|
| Symbol | |
|---|
| ID | 6968493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 133760 |
|---|
| End bp | 135613 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643384201 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002268724 |
|---|
| Protein GI | 209398273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00449065 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA CTTTGCCGTT TAAACCCCAT GTGCTGGCGC TAATTTGCAG TGCCGGGCTT
TGTGCCGCCT CTGCCGGGCT ATATATAAAA AGCCGCACAG TGGAAGCGCC TGTGGAAACG
CAATCGACAC AACTGGCTGT GTCTGACGCT GCCGCAGTTA CGCTTCCTGC AACGGTTTCC
GCACCTCCCG TAACACCCGC CGTCGTCAAA TCCGCATTCA GCACTGCACA AATAGATCAA
TGGGTCGCGC CCGTCGCGCT GTATCCCGAC GCCCTACTTT CGCAGGTGCT GATGGCATCA
ACCTATCCGA CAAACGTTGC TCAAGCAGTG CAATGGTCGC ACGATAATCC ACTTAAACAA
GGCGATGCTG CTATTCAGGC GGTATCTGAC CAGCCGTGGG ACGCCAGCGT TAAATCACTG
GTGGCCTTTC CACAATTGAT GGCATTGATG GGCGAAAACC CGCAATGGGT GCAAAACCTG
GGCGATGCTT TTCTGGCCCA GCCGCAGGAC GTGATGGACT CGGTACAACG ATTGCGGCAA
CTGGCACAAC AAACCGGCTC GCTGAAGTCA TCAACCGAAC AGAAAGTTAT TACCACAACG
AAGAAAACTG TACCGGTAAC ACAGACAGTC ACGGCTCCCG TCATACCATC CAATACCGTT
TCAACTGCCA ACCCTGTCAT TACAGAGCCT GCAACAACCG TCATTTCCAT TGAGCCCGGC
AATCCTGATG TGGTCTATAT TCCCAACTAC AACCCAACCG TGGTTTACGG GAACTGGGCC
AATACTGCGT ATCCGCCGGT TTATCTGCCA CCACCAGCCG GAGAACCGTT TGTTGACAGC
TTTGTACGCG GATTCGGCTA TAGCATGGGC GTTGCTACCA CGTACGCACT ATTCAGCAGC
ATCGACTGGG ATGACGACGA TCATGACCAT CATCATCATG ACGATGATAA TTATCATCAC
CACGATGGCG GTCATCGTGA CGGTAATGGC TGGCAACATA ACGGCGACAA CATCAATATC
GACGTCAACA ATTTCAACCG TATCACCGGT GAGCATCTTA CTGATAAGAA TATGGCATGG
CGGCACAATC CAAACTACCG TAATGGTGTG CCCTATCATG ATCAGGATAT GGCAAAGCGG
TTTCATCAAA CTGATGTCAA CGGCGGAATG AGTGCCACGC AGCTACCTGC TCCAACACGC
GACAGCCAGC GTCAGGCGGC AGCAAGTCAG TTTCAGCAAC GAACACACGC CGCCCCCGTC
ATTACACGAG ATACCCAACG TCAGGCAGCG GCACAGCGGT TTAATGAAGC TGAACACTAT
GGGAGCTATG ACGACTTCCG CGACTTCAGC CGTCGCCAAC CACTGACCCA GCAACAAAAG
GACGCCGCTC GTCAGCGTTA TCAGTCAGCT TCTCCTGAGC AGCGCCAGGC AGTTCACGAG
AAAATGCAGA CTAACCCGCA GAACCAGCAG CGAAGAGAGG CAGCGCGTGA GCGCATTCAG
CCCGCCTCGC CTGAGCAGCG CCAGGCAGTC CGCGAGAAAA TGCAGACTAA CCCACAGATC
CAGCAGCGAA GAGACGCAGC GCGTGAGCGT ATTCAGTCAG CCTCGCCTGA GCAGCGCCAG
GTGTTTAAGG AAAAAGTACA GCAGCGCCCA CTGAACCAAC AGCAACGTGA TAACGCCCGC
CAGCGTGTTC AATCAGCATC ACCTGAACAA CGTCAGGTTT TTCGGGAGAA AGCTCAGGAG
AGCCGCCCAC AACGTCTAAA CGACAGTAAC CATACTGCCA GGCTGAATAA CGAGCAACGG
TCAGCAGTAC GCGAACGTCT CTCTGAGCGC GGAGCAAGGC GACTGGAAAG GTAA
|
|---|
| Protein sequence | MKMTLPFKPH VLALICSAGL CAASAGLYIK SRTVEAPVET QSTQLAVSDA AAVTLPATVS
APPVTPAVVK SAFSTAQIDQ WVAPVALYPD ALLSQVLMAS TYPTNVAQAV QWSHDNPLKQ
GDAAIQAVSD QPWDASVKSL VAFPQLMALM GENPQWVQNL GDAFLAQPQD VMDSVQRLRQ
LAQQTGSLKS STEQKVITTT KKTVPVTQTV TAPVIPSNTV STANPVITEP ATTVISIEPG
NPDVVYIPNY NPTVVYGNWA NTAYPPVYLP PPAGEPFVDS FVRGFGYSMG VATTYALFSS
IDWDDDDHDH HHHDDDNYHH HDGGHRDGNG WQHNGDNINI DVNNFNRITG EHLTDKNMAW
RHNPNYRNGV PYHDQDMAKR FHQTDVNGGM SATQLPAPTR DSQRQAAASQ FQQRTHAAPV
ITRDTQRQAA AQRFNEAEHY GSYDDFRDFS RRQPLTQQQK DAARQRYQSA SPEQRQAVHE
KMQTNPQNQQ RREAARERIQ PASPEQRQAV REKMQTNPQI QQRRDAARER IQSASPEQRQ
VFKEKVQQRP LNQQQRDNAR QRVQSASPEQ RQVFREKAQE SRPQRLNDSN HTARLNNEQR
SAVRERLSER GARRLER
|
|---|
| |