| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_04097 |
|---|
| Symbol | ytfR |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 4362673 |
|---|
| End bp | 4364175 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted sugar transporter subunit: ATP-binding component of ABC superfamily |
|---|
| Protein accession | ACT45886 |
|---|
| Protein GI | 253980216 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTA ACCAACACCA GGAGATCCTC CGCACCGAAG GATTAAGTAA ATTTTTCCCC
GGCGTCAAAG CGTTAGACAA CGTTGATTTC AGCCTGCGCC GCGGCGAAAT CATGGCGCTG
CTCGGTGAAA ACGGGGCAGG AAAATCAACG CTAATCAAAG CATTAACTGG TGTATACCAC
GCCGATCGCG GCACCATCTG GCTGGAAGGC CAGGCTATCT CACCGAAAAA TACCGCCCAT
GCACAACAAC TCGGTATCGG CACCGTCTAT CAGGAAGTAA ACCTGCTACC CAATATGTCG
GTCGCTGATA ATCTATTTAT AGGCCGCGAA CCCAAACGCT TCGGCCTTCT ACGCCGCAAA
GAGATGGAAA AGCGCGCCAC CGAACTGATG GCATCTTACG GTTTCTCCCT CGACGTGCGC
GAACCGCTCA ACCGCTTTTC AGTCGCGATG CAGCAAATCG TCGCTATTTG CCGGGCTATC
GATCTCTCTG CCAAAGTGCT GATCCTCGAT GAACCCACCG CCAGTCTCGA CACCCAGGAA
GTGGAGTTAC TGTTTGACCT GATGCGTCAG TTGCGCGATC GCGGCGTCAG CCTGATTTTT
GTCACTCACT TTCTCGATCA GGTCTATCAG GTCAGCGATC GGATCACCGT CTTACGCAAC
GGCAGTTTCG TAGGCTGTCG GGAAACGTGC GAGCTACCGC AGATCGAACT GGTAAAAATG
ATGCTGGGGC GCGAGCTGGA TACCCACGCG CTACAGCGTG CCGGGCGAAC ATTGTTGAGC
GACAAACCCG TTGCCGCGTT CAAAAATTAC GGCAAAAAAG GAACGATCGC ACCGTTTGAT
CTCGAAGTAC GCCCCGGCGA GATCGTCGGT CTGGCTGGAT TGCTGGGATC AGGACGTACC
GAAACCGCCG AAGTGATCTT CGGTATCAAA CCTGCTGACA GCGGCACGGC GTTGATCAAA
GGCAAACCGC AAAACCTGCG ATCGCCACAT CAGGCTTCGG TACAGGGCAT TGGCTTCTGC
CCGGAAGACA GGAAAACCGA TGGCATCATC GCTGCCGCCT CGGTGCGGGA AAATATCATC
CTCGCTCTCC AGGCCCAGCG CGGCTGGCTA CGTCCCATTT CCCGCAAAGA ACAGCAAGAG
ATTGCCGAAC GCTTTATCCG CCAGCTTGGC ATTCGCACAC CTTCAACTGA ACAACCGATT
GAATTTCTCT CTGGCGGCAA TCAGCAAAAA GTGTTGCTTT CACGTTGGCT ACTGACCCGA
CCGCAATTTC TGATCCTTGA TGAGCCAACT CGCGGCATTG ATGTTGGTGC CCACGCCGAG
ATCATCCGCC TGATTGAAAC GCTATGCGCC GATGGTCTGG CGCTGCTGGT GATCTCCTCC
GAACTGGAAG AACTGGTGGG CTATGCCGAC CGGGTGATCA TCATGCGCGA TCGCAAACAG
GTGGCGGAGA TCCCGCTGGC AGAGCTTTCC GTTCCGGCGA TCATGAACGC CATTGCGGCG
TAA
|
|---|
| Protein sequence | MTTNQHQEIL RTEGLSKFFP GVKALDNVDF SLRRGEIMAL LGENGAGKST LIKALTGVYH
ADRGTIWLEG QAISPKNTAH AQQLGIGTVY QEVNLLPNMS VADNLFIGRE PKRFGLLRRK
EMEKRATELM ASYGFSLDVR EPLNRFSVAM QQIVAICRAI DLSAKVLILD EPTASLDTQE
VELLFDLMRQ LRDRGVSLIF VTHFLDQVYQ VSDRITVLRN GSFVGCRETC ELPQIELVKM
MLGRELDTHA LQRAGRTLLS DKPVAAFKNY GKKGTIAPFD LEVRPGEIVG LAGLLGSGRT
ETAEVIFGIK PADSGTALIK GKPQNLRSPH QASVQGIGFC PEDRKTDGII AAASVRENII
LALQAQRGWL RPISRKEQQE IAERFIRQLG IRTPSTEQPI EFLSGGNQQK VLLSRWLLTR
PQFLILDEPT RGIDVGAHAE IIRLIETLCA DGLALLVISS ELEELVGYAD RVIIMRDRKQ
VAEIPLAELS VPAIMNAIAA
|
|---|
| |