Gene ECD_03246 details

Gene Information

• Locus tag: ECD_03246
• Symbol: yrfC
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: -
• Start bp: 3381811
• End bp: 3382350
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 56%
• Product: predicted fimbrial assembly protein
• Protein accession: ACT45049
• Protein GI: 253979379

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0184344
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCGC CAATTAATTT TTTGCCCTGG CGACAGCAAC GCCGGACCGC TTTTCTGCGT 
TTCTGGTTGC TGATGTTCGT TGCGCCTCTG CTGCTGGCCG TCGGGATAAC GCTAATACTG 
CGTCTGACAG GCAGCGCCGA AGCGCGCATA GACGCAGTTT TGCTTCAGGC GGAACAACAA 
CTCGCCCGCA GCTTACAGAT AACGAAGCCA CGTTTGCTGG AGCAACAGCA GTTACGCGAA 
CAGCGTTCGC AACGGCAGCG CCAGCGACAA TTTACCCGCG ACTGGCAATC TGCGCTGGAA 
GCACTGGCGG CGCTTTTACC CGAGCACGCC TGGCTGACAA CGATAAGCTG GCAGCAGGGA 
ACGCTGGAGA TCAAGGGGCT GACAACAAGC ATTACCGCGT TAAACGCACT AGAAACGTCA 
CTCCGCCAGG ATGCGTCTTT TCATCTCAAT CAGCGGGGAG CCACGCAGCA GGATGCGCAG 
GGACGCTGGC AATTTGAGTA TCAGTTAACA AGGAAGGTTA GCGATGAACA TGTTCTTTGA 

 

Protein sequence

MNPPINFLPW RQQRRTAFLR FWLLMFVAPL LLAVGITLIL RLTGSAEARI DAVLLQAEQQ 
LARSLQITKP RLLEQQQLRE QRSQRQRQRQ FTRDWQSALE ALAALLPEHA WLTTISWQQG 
TLEIKGLTTS ITALNALETS LRQDASFHLN QRGATQQDAQ GRWQFEYQLT RKVSDEHVL