Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02981 |
Symbol | tdcE |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 3126423 |
End bp | 3128717 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | pyruvate formate-lyase 4/2-ketobutyrate formate-lyase |
Protein accession | ACT44785 |
Protein GI | 253979115 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGTAG ATATTGATAC CAGCGATAAG CTGTACGCCG ACGCATGGCT TGGCTTTAAA GGTACGGACT GGAAAAACGA AATTAATGTC CGCGATTTTA TTCAACATAA CTATACACCG TATGAAGGCG ATGAATCTTT CCTCGCCGAA GCGACGCCTG CCACCACGGA ATTGTGGGAA AAAGTAATGG AAGGCATCCG TATCGAAAAT GCAACCCACG CGCCGGTTGA TTTCGATACC AATATTGCCA CCACAATTAC CGCTCATGAT GCGGGATATA TTAACCAGCC GCTGGAAAAA ATTGTTGGCC TGCAAACGGA TGCGCCGTTG AAACGTGCGC TACACCCGTT CGGTGGCATT AATATGATTA AAAGTTCATT CCACGCCTAT GGCCGAGAAA TGGACAGTGA ATTTGAATAT CTGTTTACCG ATCTGCGTAA AACCCATAAC CAGGGCGTAT TTGATGTTTA CTCACCGGAT ATGCTGCGCT GCCGTAAATC TGGCGTGCTG ACCGGTTTAC CAGATGGCTA TGGCCGTGGG CGCATTATCG GTGACTATCG CCGCGTAGCG CTGTATGGCA TCAGTTATCT GGTACGTGAA CGCGAACTGC AATTTGCCGA TCTCCAGTCT CGTCTGGAAA AAGGCGAGGA TCTGGAAGCC ACCATCCGTC TGCGTGAGGA GCTGGCAGAG CATCGTCATG CGCTGTTGCA GATTCAGGAA ATGGCGGCGA AATATGGCTT TGATATCTCT CGCCCGGCGC AGAATGCGCA GGAAGCGGTG CAGTGGCTCT ACTTCGCTTA TCTGGCGGCA GTGAAATCGC AAAATGGCGG CGCGATGTCG CTGGGCCGCA CGGCATCGTT CCTCGATATC TACATTGAGC GCGACTTTAA AGCTGGCGTA CTCAATGAGC AGCAGGCACA GGAACTGATC GATCACTTCA TCATGAAGAT CCGTATGGTA CGCTTCCTGC GTACACCGGA ATTTGATTCG CTGTTCTCCG GCGACCCAAT CTGGGCGACG GAAGTGATCG GCGGGATGGG GCTGGACGGT CGTACGCTGG TGACCAAAAA CTCCTTCCGC TATTTGCACA CCCTGCACAC TATGGGGCCG GCACCGGAAC CTAACCTGAC CATTCTTTGG TCGGAAGAAT TACCGATTGC CTTCAAAAAA TATGCCGCGC AGGTGTCGAT CGTCACCTCT TCCTTGCAGT ATGAAAATGA CGATCTGATG CGTACTGACT TCAACAGCGA CGATTACGCG ATTGCCTGCT GCGTCAGCCC AATGGTGATT GGTAAGCAAA TGCAGTTCTT TGGTGCACGC GCTAACCTGG CGAAAACGCT GCTCTACGCA ATTAACGGCG GGGTGGACGA GAAGCTGAAG ATTCAGGTCG GGCCGAAAAC AGCACCGCTG ATGGACGACG TGCTGGATTA CGACAAAGTG ATGGACAGCC TCGATCACTT CATGGACTGG CTGGCGGTGC AGTACATCAG CGCGCTGAAT ATCATTCACT ACATGCACGA CAAGTACAGC TACGAAGCTT CGCTGATGGC GCTGCACGAT CGTGATGTCT ATCGCACTAT GGCATGCGGC ATCGCGGGCC TGTCGGTGGC GACGGACTCC CTGTCTGCCA TCAAATATGC CCGCGTGAAA CCAATCCGTG ACGAAAACGG CCTGGCGGTG GACTTTGAAA TCGACGGTGA ATATCCGCAG TACGGCAACA ACGACGAGCG CGTAGACAGC ATTGCCTGCG ACCTGGTTGA ACGCTTTATG AAGAAAATTA AAGCGCTGCC AACCTATCGC AACGCCGTCC CTACCCAGTC GATTCTGACT ATCACTTCTA ACGTGGTGTA CGGCCAGAAA ACCGGTAATA CGCCGGACGG TCGTCGCGCC GGAACACCGT TCGCGCCGGG CGCTAACCCG ATGCATGGTC GTGACCGCAA AGGTGCCGTG GCCTCATTGA CGTCGGTGGC GAAACTGCCG TTCACCTACG CCAAAGATGG GATCTCGTAC ACCTTCTCAA TCGTTCCTGC GGCGCTGGGC AAAGAAGATC CAGTACGTAA AACCAACCTT GTCGGCCTGC TGGATGGGTA TTTCCACCAC GAAGCGGATG TCGAAGGCGG TCAACACCTC AACGTCAACG TAATGAATCG GGAAATGCTG CTGGATGCCA TCGAGCACCC GGAAAAATAT CCTAACCTGA CAATCCGTGT CTCTGGCTAC GCCGTGCGCT TCAACGCACT GACCCGTGAA CAGCAACAGG ATGTTATTTC ACGTACCTTT ACCCAGGCGC TCTGA
|
Protein sequence | MKVDIDTSDK LYADAWLGFK GTDWKNEINV RDFIQHNYTP YEGDESFLAE ATPATTELWE KVMEGIRIEN ATHAPVDFDT NIATTITAHD AGYINQPLEK IVGLQTDAPL KRALHPFGGI NMIKSSFHAY GREMDSEFEY LFTDLRKTHN QGVFDVYSPD MLRCRKSGVL TGLPDGYGRG RIIGDYRRVA LYGISYLVRE RELQFADLQS RLEKGEDLEA TIRLREELAE HRHALLQIQE MAAKYGFDIS RPAQNAQEAV QWLYFAYLAA VKSQNGGAMS LGRTASFLDI YIERDFKAGV LNEQQAQELI DHFIMKIRMV RFLRTPEFDS LFSGDPIWAT EVIGGMGLDG RTLVTKNSFR YLHTLHTMGP APEPNLTILW SEELPIAFKK YAAQVSIVTS SLQYENDDLM RTDFNSDDYA IACCVSPMVI GKQMQFFGAR ANLAKTLLYA INGGVDEKLK IQVGPKTAPL MDDVLDYDKV MDSLDHFMDW LAVQYISALN IIHYMHDKYS YEASLMALHD RDVYRTMACG IAGLSVATDS LSAIKYARVK PIRDENGLAV DFEIDGEYPQ YGNNDERVDS IACDLVERFM KKIKALPTYR NAVPTQSILT ITSNVVYGQK TGNTPDGRRA GTPFAPGANP MHGRDRKGAV ASLTSVAKLP FTYAKDGISY TFSIVPAALG KEDPVRKTNL VGLLDGYFHH EADVEGGQHL NVNVMNREML LDAIEHPEKY PNLTIRVSGY AVRFNALTRE QQQDVISRTF TQAL
|
| |