| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_02636 |
|---|
| Symbol | yqcB |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 2755592 |
|---|
| End bp | 2756374 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | tRNA pseudouridine synthase |
|---|
| Protein accession | ACT44453 |
|---|
| Protein GI | 253978783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.908245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA TACTCTATCA GGATGAATGG CTGGTTGCGG TAAATAAACC CTCCGGCTGG
CTGGTTCACC GCAGCTGGCT GGATCGCGAC GAGAAAGTAG TGGTCATGCA AACCGTGCGT
GACCAGATAG GCCAGCATGT TTTTACTGCT CATCGTCTGG ACCGACCCAC TTCTGGTGTG
TTGTTGATGG GATTATCCAG CGAGGCCGGA CGGCTGCTGG CACAACAGTT TGAACAGCAC
CAAATCCAGA AACGTTACCA TGCGATTGTG CGCGGCTGGT TGATGGAAGA AGCGGTGCTG
GATTATCCAC TGGTGGAAGA ACTGGACAAA ATCGCTGATA AATTTGCCCG CGAAGATAAA
GGCCCGCAGC CAGCAGTGAC GCATTATCGC GGTCTGGCGA CCGTAGAAAT GCCGGTAGCG
ACCGGACGTT ACCCGACCAC GCGCTACGGC CTGGTGGAAC TGGAGCCGAA AACCGGACGC
AAACATCAGC TTCGCCGACA TCTTGCCCAT TTGCGTCATC CGATTATTGG CGATAGCAAA
CATGGCGATT TACGCCAGAA TCGCAGCGGT GCTGAGCATT TTGGCCTCCA GCGGTTAATG
CTACATGCCA GTCAGTTGTC ATTGACGCAT CCTTTTACTG GCGAGCCGCT GACTATTCAC
GCGGGCCTGG ACGACACCTG GATGCAGGCG TTATCACAAT TTGGCTGGCG CGGTCTGCTT
CCTGAAAATG AAAGGGTTGA GTTCAGTGCG CCATCGGGTC AGGATGGAGA GATAAGTTCC
TAA
|
|---|
| Protein sequence | MLEILYQDEW LVAVNKPSGW LVHRSWLDRD EKVVVMQTVR DQIGQHVFTA HRLDRPTSGV
LLMGLSSEAG RLLAQQFEQH QIQKRYHAIV RGWLMEEAVL DYPLVEELDK IADKFAREDK
GPQPAVTHYR GLATVEMPVA TGRYPTTRYG LVELEPKTGR KHQLRRHLAH LRHPIIGDSK
HGDLRQNRSG AEHFGLQRLM LHASQLSLTH PFTGEPLTIH AGLDDTWMQA LSQFGWRGLL
PENERVEFSA PSGQDGEISS
|
|---|
| |