| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01453 |
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| Symbol | yddB |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | - |
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| Start bp | 1530728 |
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| End bp | 1533100 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted porin protein |
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| Protein accession | ACT43335 |
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| Protein GI | 253977665 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAG TTCTTATTCC TGGCGTCATT TTATGTGGCG CTGATGTGGC GCAGGCCGTC
GATGACAAAA ACATGTACAT GCATTTTTTT GAAGAGATGA CGGTCTATGC TCCTGTCCCT
GTACCCGTAA ACGGCAACAC GCATTACACC AGTGAAAGCA TCGAGCGTTT ACCGACCGGG
AATGGCAATA TCAGCGATCT GCTGAGAACC AACCCTGCGG TACGCATGGA TTCAACGCAA
AGTACCTCGT TGAACCAGGG AGATATTCGC CCTGAGAAAA TCTCTATTCA CGGTGCGTCG
CCCTACCAGA ATGCCTATTT GATTGACGGT ATTAGTGCAA CTAATAACCT GAACCCAGCG
AATGAGTCCG ATGCCAGTAG TGCAACCAAT ATTAGCGGGA TGTCACAGGG GTATTATCTT
GATGTCAGCT TACTGGACAA TGTGACGCTT TATGACAGTT TTGTGCCGGT TGAATTTGGT
CGCTTCAATG GCGGGGTAAT TGATGCAAAG ATCAAACGCT TCAACGCTGA TGATAGCAAG
GTGAAATTGG GTTATCGCAC TACGCGTTCG GACTGGTTAA CATCGCATAT CGATGAGAAT
AACAAGAGCG CATTTAATCA AGGCTCTTCA GGAAGTACTT ATTACTCCCC AGATTTTAAA
AAGAACTTTT ATACCTTGTC GTTTAATCAG GAACTCGCTG ATAACTTCGG CGTTACCGCC
GGTTTATCGC GCCGCCAGTC TGATATCACC CGCGCGGATT ATGTTTCGAA TGACGGCATT
GTCGCCGGTC GGGCACAGTA TAAAAACGTT ATCGATACTG CATTGAGCAA ATTTACCTGG
TTTGCCAGCG ACCGCTTTAC CCACGATTTA ACCTTAAAAT ATACCGGCTC CAGCCGTGAT
TATAATACCA GCACCTTCCC GCAGTCTGAT CGCGAAATGG GTAATAAATC CTATGGTCTG
GCATGGGATA TGGATACGCA GCTCGCATGG GCCAAACTGC GTACCACCGT TGGTTGGGAT
CATATTAGTG ATTATACCCG TCACGATCAT GACATCTGGT ACACCGAACT TTCATGTACA
TATGGTGATA TTACAGGGCG TTGCACCCGT GGCGGATTAG GACACATTTC CCAGGCTGTA
GATAATTACA CCTTCAAAAC ACGCCTGGAC TGGCAAAAAT TCGCCGTGGG TAATGTTTCG
CATCAACCCT ACTTCGGCGC GGAATACATC TATTCCGATG CGTGGACTGA ACGCCATAAC
CAGTCTGAAT CCTATGTGAT TAATGCTGCC GGAAAGAAAA CTAACCATAC CATTTACCTT
AAAGGTAAAG GCCGCCTGGG AATTGACAAC TACACGCTGT ATATGGCGGA TCGCATTAGC
TGGCGTAATG TGTCATTAAT GCCCGGCGTG CGGTATGACT ATGACAACTA TCTGTCAAAC
CACAATATCT CCCCGCGCTT TATGACGGAA TGGGATATTT TTGCTAATCA AACCTCAATG
ATTACAGTAG GTTATAACCG TTACTATGGC GGGAATATTC TTGATATGGG ATTACGTGAT
ATCCGCAATA GCTGGACGGA ATCGGTATCA GGTAATAAAA CTCTGACGCG TTATCAGGAT
TTGAAAACGC CTTATAACGA TGAACTGGCA ATGGGATTGC AGCAGAAAAT CGGTAAGAAC
GTTATTGCGC GTGCAAACTA TGTTTACCGT GAAGCGCATG ATCAAATCAG CAAAAGCAGT
CGTACCGACA GCGCGACTAA AACCACCATT ACTGAATATA ACAACGATGG CAAAACCAAA
ACGCATTCGT TCAGCCTCAG TTTTGAACTG GCCGAACCCC TGCATATCCG CCAGGTAGAT
ATTAACCCAC AAATTGTCTT TAGCTATATC AAGAGCAAGG GCAACTTGTC GTTAAACAAT
GGTTATGAGG AGAGCAATAC CGGTGATAAC CAGGTGGTTT ATAACGGTAA TCTGGTCTCT
TACGATAGCG TTCCAGTGGC AGATTTTAAT AACCCATTAA AGATCTCCTT AAACATGGAT
TTCACGCATC AACCGAGCGG GTTAGTGTGG GCGAATACGC TGGCCTGGCA AGAAGCGCGT
AAAGCTCGCA TTATCCTTGG TAAGACAAAT GCGCAATACA TCAGCGAATA TTCAGATTAC
AAGCAGTATG TTGACGAAAA ACTGGATAGC AGCCTGACCT GGGACACCCG CTTGTCCTGG
ACGCCACAAT TTCTGAAACA ACAAAACCTG ACGATCAGTG CCGATATTCT CAATGTACTG
GATAGCAAAA CCGCTGTTGA TACAACGAAC ACCGGTGTGG CGACCTACGC CAGTGGCCGT
ACTTTCTGGC TTGATGTCAG CATGAAATTT TAA
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| Protein sequence | MKRVLIPGVI LCGADVAQAV DDKNMYMHFF EEMTVYAPVP VPVNGNTHYT SESIERLPTG
NGNISDLLRT NPAVRMDSTQ STSLNQGDIR PEKISIHGAS PYQNAYLIDG ISATNNLNPA
NESDASSATN ISGMSQGYYL DVSLLDNVTL YDSFVPVEFG RFNGGVIDAK IKRFNADDSK
VKLGYRTTRS DWLTSHIDEN NKSAFNQGSS GSTYYSPDFK KNFYTLSFNQ ELADNFGVTA
GLSRRQSDIT RADYVSNDGI VAGRAQYKNV IDTALSKFTW FASDRFTHDL TLKYTGSSRD
YNTSTFPQSD REMGNKSYGL AWDMDTQLAW AKLRTTVGWD HISDYTRHDH DIWYTELSCT
YGDITGRCTR GGLGHISQAV DNYTFKTRLD WQKFAVGNVS HQPYFGAEYI YSDAWTERHN
QSESYVINAA GKKTNHTIYL KGKGRLGIDN YTLYMADRIS WRNVSLMPGV RYDYDNYLSN
HNISPRFMTE WDIFANQTSM ITVGYNRYYG GNILDMGLRD IRNSWTESVS GNKTLTRYQD
LKTPYNDELA MGLQQKIGKN VIARANYVYR EAHDQISKSS RTDSATKTTI TEYNNDGKTK
THSFSLSFEL AEPLHIRQVD INPQIVFSYI KSKGNLSLNN GYEESNTGDN QVVYNGNLVS
YDSVPVADFN NPLKISLNMD FTHQPSGLVW ANTLAWQEAR KARIILGKTN AQYISEYSDY
KQYVDEKLDS SLTWDTRLSW TPQFLKQQNL TISADILNVL DSKTAVDTTN TGVATYASGR
TFWLDVSMKF
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