| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01441 |
|---|
| Symbol | yddO |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 1512580 |
|---|
| End bp | 1513506 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | D-ala-D-ala transporter subunit |
|---|
| Protein accession | ACT43323 |
|---|
| Protein GI | 253977653 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.108844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGACA CGTTATTAAC GTTACGCGAC GTCCATATCA ATTTCCCGGC CCGTAAAAAC
TGGCTTGGTA AAACTACGGA ACATGTTCAT GCCATTAATG GTATTGATTT ACAGATCCGC
CGTGGTGAAA CCTTAGGGAT CGTCGGCGAG TCAGGCTGCG GCAAAAGCAC CCTCGCACAG
CTTTTAATGG GTATGCTGCA ACCGAGCCAC GGGCAGTACA TCCGTTCTGG CTCACAACGC
ATTATGCAGA TGGTGTTTCA GGACCCGCTC TCTTCGCTTA ATCCGCGCTT ACCGGTGTGG
CGCATCATCA CAGAACCGCT CTGGATAGCT AAGCGTAGTA GTGAACAACA GCGGCGAGCG
TTGGCAGAGG AGTTGGCTGT GCAGGTGGGT ATTCGTCCGG AGTATCTCGA CCGCCTGCCT
CATGCGTTCT CCGGCGGGCA GCGGCAACGT ATCGCCATTG CCAGAGCACT CTCTTCGCAG
CCTGACGTGA TTGTGCTTGA TGAGCCAACC TCTGCGATGG ATATCTCCGT TCAGGCGCAG
ATCCTCAATT TACTGGTAAC GCTACAGGAA AATCACGGGC TGACCTATGT GCTGATTTCA
CACAATGTCT CGGTGATACG TCATATGAGC GATCGGGTGG CGGTGATGTA TCTCGGGCAG
ATTGTAGAAC TGGGCGACGC GCAGCAGGTG CTGACGGCAC CTGCACATCC ATACACCCGA
TTATTGCTGG ATTCCCTCCC CGCCATTGAT AAACCGCTGG AGGAAGAATG GGCATTACGT
AAAACGGATC TGCCGGGAAA CCGCACGTTG CCGCAAGGCT GTTTTTTCTA CGAACGTTGC
CCGCTGGCAA CCCACGGATG TGAAGTCCGG CAATCATTAG CAATAAGGGA GGACGGACGT
GAGCTCCGGT GCTGGCGGGC GCTGTAG
|
|---|
| Protein sequence | MSDTLLTLRD VHINFPARKN WLGKTTEHVH AINGIDLQIR RGETLGIVGE SGCGKSTLAQ
LLMGMLQPSH GQYIRSGSQR IMQMVFQDPL SSLNPRLPVW RIITEPLWIA KRSSEQQRRA
LAEELAVQVG IRPEYLDRLP HAFSGGQRQR IAIARALSSQ PDVIVLDEPT SAMDISVQAQ
ILNLLVTLQE NHGLTYVLIS HNVSVIRHMS DRVAVMYLGQ IVELGDAQQV LTAPAHPYTR
LLLDSLPAID KPLEEEWALR KTDLPGNRTL PQGCFFYERC PLATHGCEVR QSLAIREDGR
ELRCWRAL
|
|---|
| |