| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01027 |
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| Symbol | ycdT |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | + |
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| Start bp | 1097159 |
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| End bp | 1098517 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | |
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| Product | predicted diguanylate cyclase |
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| Protein accession | ACT42922 |
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| Protein GI | 253977252 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAG ACTATTTGAG AATTAGTAGT ACTGTATTAG TGAGCTTATT GTTTGGGCTT
GCTTTGGTTT TGGTGAATAG TTGGTTTAAT CAGCCAGGCG TTGAGGAAGT TGTTCCACGA
TCAACCTATC TGATGGTAAT GATTGCTTTA TTTTTTATCG ATACTGTTGC ATTTATTTTT
ATGCAGTTGT ATTTCATTTA TGACCGTAGG CAATTTTCAA ACTGTGTACT TAGTTTGGCT
TTTCTGAGTT GTTTGATTTA CTTTGTTAAA ACCGTCATTA TCATTCAGCA AATTATTGAG
GAGCGTTTGA CAAGCAGTGT TGTCCAAAAT GACATTGCAA TCTATTATTT GTTTCGTCAG
ATGAGTTTGT GCATATTAAT ATTTCTGGCA TTGGTGAATA AAGTTAGTGA AAACACAAAA
CAGCGCAATT TATTTTCCAA AAAAATGACT TTGTGCATAA GTTTGTTTTT TGTTTTTGGG
GGGCCGATAG TTGCTCACAT ACTTTCTAGT CATTATGAGA GCTACAATTT ACACATTGCC
GAGTTAACCA ATGAAAATGG TCAGGTGGTT TGGAAAGCCT CATATGTTAC CATAATGATT
TTCATGTGGT TAACCTTGCT TTCGGTTAAT CTATACTTTA ATGGTTTACG CTATGATATC
TGGAATGGAG TGACGGTGAT TGCTTTTTGT GCCGTACTGT ACAATATCTC TCTGTTATTT
ATGAGCAGGT ATAGCGTGTC CACTTGGTAT ATTAGTCGCA CTATTGAAGT AGTCAGTAAG
TTAACCGTTA TGGTAATATT TATGTGCCAT ATATTCAGTG CGCTACGAGT AACAAAGAAC
ATTGCACATC GCGATCCCTT AACCAATATA TTTAACAGAA ATTATTTTTT TAATGAACTG
ACAGTTCAAT CAGCATCAGC CCAAAAAACG CCTTATTGCG TCATGATTAT GGATATCGAC
CACTTCAAAA AAGTCAACGA CACCTGGGGG CATCCGGTTG GCGATCAGGT GATAAAAACA
GTGGTGAATA TCATTGGGAA AAGCATACGA CCAGATGACC TTTTAGCGCG CGTCGGCGGC
GAAGAGTTTG GCGTCTTGCT GACGGACATC GATACTGAAC GTGCGAAAGC TTTAGCGGAA
AGGATTCGGG AAAATGTTGA GCGTTTAACT GGCGATAATC CTGAATACGC TATACCACAA
AAAGTGACGA TTAGTATTGG CGCTGTTGTG ACTCAGGAAA ATGCGTTAAA CCCAAATGAG
ATCTATCGAC TGGCTGATAA CGCACTTTAC GAGGCGAAAG AGACCGGGCG TAATAAGGTG
GTTGTGAGGG ATGTGGTGAA TTTTTGTGAG TCACCATAA
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| Protein sequence | MEKDYLRISS TVLVSLLFGL ALVLVNSWFN QPGVEEVVPR STYLMVMIAL FFIDTVAFIF
MQLYFIYDRR QFSNCVLSLA FLSCLIYFVK TVIIIQQIIE ERLTSSVVQN DIAIYYLFRQ
MSLCILIFLA LVNKVSENTK QRNLFSKKMT LCISLFFVFG GPIVAHILSS HYESYNLHIA
ELTNENGQVV WKASYVTIMI FMWLTLLSVN LYFNGLRYDI WNGVTVIAFC AVLYNISLLF
MSRYSVSTWY ISRTIEVVSK LTVMVIFMCH IFSALRVTKN IAHRDPLTNI FNRNYFFNEL
TVQSASAQKT PYCVMIMDID HFKKVNDTWG HPVGDQVIKT VVNIIGKSIR PDDLLARVGG
EEFGVLLTDI DTERAKALAE RIRENVERLT GDNPEYAIPQ KVTISIGAVV TQENALNPNE
IYRLADNALY EAKETGRNKV VVRDVVNFCE SP
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