Gene ECD_00834 details

Gene Information

• Locus tag: ECD_00834
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 882889
• End bp: 883641
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 56%
• Product: putative capsid scaffolding protein
• Protein accession: ACT42729
• Protein GI: 253977059

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGTGA AAGCAAAGCG TTTTCGCATC GGGGTGGAAG GTGCCACCAC CGACGGACGC 
GAAATCCAGC GTGAATGGCT GGAACAGATG GCAGCCAGCT ACAACCCGGC GGTGTATACC 
GCGCTGATTA ACCTTGAGCA CATCAAGTCT TATCTGCCGG ACAGCACCTT TAACCGCTAC 
GGCAAGGTGA CGGCGCTGTT TGCTGAGGAA ATCACGGAAG GTCCGCTGGC AGGCAAGATG 
GCGCTGTATG CCGACGTTGA GCCAACGGAG TCCCTGGTGG AACTGGTGAA AAAAGGCCAG 
AAATTATTCA CCTCTATGGA AGTCAGCCCG AAGTTCGCTG ATACGGGCAA AGCCTACCTG 
GTCGGCCTGG CTGCCACTGA TGACCCTGCC AGTCTGGGCA CTGAAATGCT GACATTCAGC 
GCCAGTGCAG CCCATAACCC GCTGGCAAAC CGCAAGCAGA ATCCTGCCAA TCTCTTTACC 
GCTGCAGAGG AAACGGTGAT CGAACTGGAG GAAGTCCAGG ACGACAAACC GTCCCTGTTT 
TCCCGCGTCA CGGCGCTGTT CACCAAAAAA GAGCAGTCCG ATGACGCCCG GTTCTCTGAT 
GTGCATAAGG CCGTGGAGCT GGTCGCCACT GAGCAGCAAA ACCTGAGCGC GCGAACCGAA 
AAATCTCTGT CTGAGCAGGA AGAACGCCTG TCTGAACTGG AGTCTGCTCT GCAGAAGCAG 
CAACGGGCAA TGCCTGTAGT TCCACACTGG TGA 

 

Protein sequence

MTVKAKRFRI GVEGATTDGR EIQREWLEQM AASYNPAVYT ALINLEHIKS YLPDSTFNRY 
GKVTALFAEE ITEGPLAGKM ALYADVEPTE SLVELVKKGQ KLFTSMEVSP KFADTGKAYL 
VGLAATDDPA SLGTEMLTFS ASAAHNPLAN RKQNPANLFT AAEETVIELE EVQDDKPSLF 
SRVTALFTKK EQSDDARFSD VHKAVELVAT EQQNLSARTE KSLSEQEERL SELESALQKQ 
QRAMPVVPHW