| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2907 |
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| Symbol | |
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| ID | 4664487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 3404446 |
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| End bp | 3405795 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639821168 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_968345 |
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| Protein GI | 120603945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.182902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCCAA CCCTGCCGTT CCGCGGCTTC ACCTCAGCGC CGGAACCCCG GTCCATCCGT
CAGAGCATGA GCGAAACGCT GCCCATATCC CCCGACGCCC CGTGGCTGGC CCCGCTGGCG
GGCTATTCCG ACCTGTCCTT CCGGCTGCTG TGCCGTAAGG CTGGGGCCGC CGTGTGCTGC
ACCGAAATGG TCAGCGCCAA GGGGCTCATC TACTACAGCC CCGGTACCCG CGACCTGCTT
GCCACCACGC CGGAGGACGC ACCTCTGGTG GTGCAGCTTT TCGGCTGCGA CCCCGACATC
ATGGTACGCG CCATGGAGCC CTTGCTCGAA CAGGGGTTCC GGTGGTTCGA CCTCAACATG
GGCTGCTCCG TGCCCAAGGT GGTGAAGACC GGTTGCGGGG CTGCCATGCT GCGTGACGTG
CCGCAGGCGC TTGCCGTGGC CCGCGCCATG CTGCGTACCG CAGGCGCGGG GCGGGTGGGT
TTCAAGTTCA GGCTTGGCTG GGACGTAGGT CAGGAGGTAT GGGCCGACCT TGGGCGCGCT
CTCGCCGACC TCGGTGCGGG GTGGGTGACG CTGCATCCGC GTTATGCCCG TCAGGGCTTC
TCCGGCGAGG CACGGTGGAG CACGCTGGGT GAGCTTGTAC GGGCCGTTTC CGTGCCTGTC
ATCGCCAGCG GCGACCTCTT CACTGCTGCC GATGGCGTCC GCTGCCTGCG TGAGACGGGC
GTGGCATCGG TGATGTACGC GCGTGGTGCG TTGAACGACC CCGGAGTGTT CCATGCGCAT
CGCGAACGTG TCGCCGGAAG GCCCGACCCC GGCTATACGC CGCAACGGTT GCGGGCACTC
ATCACCCGCC ATGCCGAACT TGCACGGCAA TATGCGCCGG GACGCTCGGC CCTGCTCAAG
ATGCGCACCT TCGTGCCCCG CTATGTGCGG CACCTGCCGG GAGCGCGGGC GTTGCGCCAG
CATCTCGCCT CATGCTTCGA GTGGGAGATG CTGGATGAAC TGCTGGCCAC CTTTTTCGCG
GACGTGCCCA CCTGTCCGGT CACGCCGGAA GGCCGGGGCG GCAAGCCGGA AACCATGCCA
AACGGTAACC CGGACGCCAT GTCCGAATGT GTGACCGGTG CTGCGGAACA CTCTGGTTGC
AGGACGCACT CGGACATGTC CGGCCATGTA GCTGGCAGCG CGTCCTCTGA AGACCCTTCC
GATGGCCCCT CCCGTTACCC CGCGGGAGAA TCCGCCATGA CGTCCGGCGA GGAGTCCGCC
ACGGCGGCGG GCACGACAGG TCGTGGCCCG GAGGTCTCTT CCACGTGTTG TACGGGGCGC
GCACAGCAAC CCACGGAGTC AGACGCATGA
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| Protein sequence | MVPTLPFRGF TSAPEPRSIR QSMSETLPIS PDAPWLAPLA GYSDLSFRLL CRKAGAAVCC
TEMVSAKGLI YYSPGTRDLL ATTPEDAPLV VQLFGCDPDI MVRAMEPLLE QGFRWFDLNM
GCSVPKVVKT GCGAAMLRDV PQALAVARAM LRTAGAGRVG FKFRLGWDVG QEVWADLGRA
LADLGAGWVT LHPRYARQGF SGEARWSTLG ELVRAVSVPV IASGDLFTAA DGVRCLRETG
VASVMYARGA LNDPGVFHAH RERVAGRPDP GYTPQRLRAL ITRHAELARQ YAPGRSALLK
MRTFVPRYVR HLPGARALRQ HLASCFEWEM LDELLATFFA DVPTCPVTPE GRGGKPETMP
NGNPDAMSEC VTGAAEHSGC RTHSDMSGHV AGSASSEDPS DGPSRYPAGE SAMTSGEESA
TAAGTTGRGP EVSSTCCTGR AQQPTESDA
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