Gene Dvul_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2886 
Symbol 
ID4664864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3373291 
End bp3374424 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content68% 
IMG OID639821147 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_968324 
Protein GI120603924 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.628877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC CCCTCCGTCT TTCCCGTTCC ATCGTCGGAC AGGCCGAAGC CGAGGCCGTA 
AGCCGCGTCA TCATCGAAGA CGGCTACCTT GGCATGGGCA GTGAAGTGAA ACGCTTCGAA
GAGGACATCG CCGCCTTTCT CGGCGTGCCT GCGAACCATG TCATCACCGC CAACACCGGT
ACCGCCGCCC TGCACCTTGC CGTGCAGGCA GCCGTGGAAC CGGGGCGCGA GGTGCTGGTG
CAGTCGCTGA CCTTCGTGGC GTCGTTCCAG GCCATCTCCG CAGCCGGGGC CGTGCCCGTG
GCCTGCGAGG TGCGCCCCGA GACCTGCACC ATCGACCTCG ATGACGCCGC CCGTCGCCTC
ACCGACAAGA CCGCGGCCAT CATGCCCGTG CACTACGCCA GCAACCCCGC CTATCTCGAC
GACGTCTACG CCTTCGCCCA GCGGCACGGG CTGCGCGTCA TCGAAGACGC GGCCCATGCC
TTCGGGTGCC GCCACGACGG CAGGCTGGTG GGCACGTTCG GCGACATCGC CTGCTTCAGC
TTCGACGGCA TCAAGAACAT CACCAGCGGC GAGGGCGGCT GCATCGTCAC CGCCGACCAG
ACCGTGGCCC AGCGCTGCCG CGACGCACGC CTTCTCTCCG TGGAGAACGA CACCGAGAAG
CGGTTCACCG GGCAGCGAAG CTGGGACTTC GATGTCACCC GTCAGGGGTG GCGCTACCAC
ATGAGCAACC TCATGGCCGC CATCGGGCGT GTGCAGCTGT CGCGCCTGCC CGGCGAATTC
GGCCCTGCAC GCAAGGCGCT GGCCGCCATC TACCGTGAAG AACTCGCGGG CGTTCCCGGC
GTAACCCTGT TCGCAACTCG GCCGGAGGAT GACATCATCC CCCATATCTT CGTGGTGCGC
ATCGACGCCG CGCGGCGTGA CGCCGTGAAG GAGGCGCTTG CCGCCGCGGG CGTGCCCACC
GGCATGCACT ACAAGCCCGC GCATCTGCTC TCCTTCTATG GCGGCGGGCG CACCTGCCTG
CCGGTGACAG AGGCCCTGTA TCACGAGATA GTGACCCTGC CGCTGCACCC CGGCGTCACC
GCCGAAGAGG TGCGCGTCAT CTGCGCCGAA CTGCGCAAGG CCCTTGCCGC CTGA
 
Protein sequence
MSTPLRLSRS IVGQAEAEAV SRVIIEDGYL GMGSEVKRFE EDIAAFLGVP ANHVITANTG 
TAALHLAVQA AVEPGREVLV QSLTFVASFQ AISAAGAVPV ACEVRPETCT IDLDDAARRL
TDKTAAIMPV HYASNPAYLD DVYAFAQRHG LRVIEDAAHA FGCRHDGRLV GTFGDIACFS
FDGIKNITSG EGGCIVTADQ TVAQRCRDAR LLSVENDTEK RFTGQRSWDF DVTRQGWRYH
MSNLMAAIGR VQLSRLPGEF GPARKALAAI YREELAGVPG VTLFATRPED DIIPHIFVVR
IDAARRDAVK EALAAAGVPT GMHYKPAHLL SFYGGGRTCL PVTEALYHEI VTLPLHPGVT
AEEVRVICAE LRKALAA