Gene Dvul_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2812 
Symbol 
ID4664538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3271700 
End bp3273859 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content66% 
IMG OID639821067 
ProductUvrD/REP helicase 
Protein accessionYP_968250 
Protein GI120603850 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAT TCGCCAAAGA ACTCAACGCG GCCCAGTATG AGGCCGTGAC CACACTCGAC 
GGCCCGGTGC TGGTCATCGC CGGTGCGGGC AGCGGCAAGA CGCGCACGGT GGTCTACCGC
CTCGCCAACC TGCTTGAGCG CGGCGTGCCC GCCTCGTCCA TCCTGCTGCT GACCTTCACC
CGCAAGGCGG CCAACGAGAT GCTGCAACGC GCCAGCCGCC TGCTGGGCTA CGGGGTGCAG
GGCATCGCCG GGGGCACCTT CCACGCCTTC GCCTATTCGC TCTTGCGCCA GTACCATCCG
GCACGCCTTG AGGGGCGCGA CCTGACCATC ATGGACGGGG CCGACAGCGT GGCCGCCATC
CAGCACTGCA AGGATGCGCT CGGCATCGCG CGGGGGGACA AGTCGTTCCC CAAGACGCAG
ACGGTGCTGT CGTTGCTCAG CAAGTCGCGC AACAAGGAAC TGCCGCTGGA CGAAGTGCTG
CGCCGCGAGG CGTACCACCT GCTGGTACAT GCAGACGGGG TCTCGCGCAT CGGCGAAGCC
TACGCCGAAT ATCGCGCGGA ACACGGCCTG CTGGACTATG ACGACCTGCT CTTCGAGGTG
GAGCGCCTGT TGCGCGAACG GCCCGACCTG CTGGCCCACC TGCGCGACAG ATACCGCTAC
ATCATGGTCG ACGAGTATCA GGACACCAAC CTCGTGCAGG CGCGGCTGGT GCAGCTTCTG
GCGGGAGAGG GCGGCAACGT CATGGCCGTG GGCGACGACG CCCAGTCCAT CTACGCCTTT
CGCGGTGCCA ACGTGCAGAA CATCCTGTCG TTCCCGCAGT TCTTTCCGGG TACGCGCATC
ATCAAGCTGG AAGAGAACTA CCGTTCCACC CAGCCGGTGC TCGACCTCAC CAACGCCATC
CTCGCCGAGG CGCCGCAGGC CTACCGCAAG CACCTGTACA CCAGCCGAGA GGACGGGGTG
CTGCCGCAGG TGGTGCGACC CTTGAGCGAC CTCACGCAGG CATCCATCGT GGTGAGTCGC
GTGAGTGAAC TGCTGCGGAC GTATCCGCCC CATGAAATCG CCGTGCTGTT CCGGGCGGGG
TTCCACTCGT ACCATGTGGA GGTACAGCTC AACAAACTGG GCATCCGCTT CCGCAAGTAC
GGCGGGGTGC GCTATTCCGA GGCCGCGCAC GTCAAGGACG TGATGGCCTA CGCCCGCCTT
GTGCTCAACC CCCTCGACCT GCCCGCGTTC CAGCGTGTGG CGGCCCTGTC GCGCGGTGTG
GGACCAAAGA CCACCCTGCG CCTCTACGAG GTCGCCCGGC AGGGTGACGC GGCGGCGACG
GCCCATGCCT GCGCCCGGTA TCCGCAACTG CGGGCCGACC TTGAACTGCT CGACAGGCTT
CGCAAGCGCA CACCTGCGCC TTCCACGTTG CTGGAAGAGG TCATCGAGCA TTACCAGCCG
CGTCTCGAAG CCGCCTACCC CGACGACTGG CCGCGCAGAC AGCAGGGGCT TGAGCAGCTT
GTGCAGATAG CCTCGGCCTA TCGCGACCTC GACCTCTTCA TCTCAGACCT GTCGCTGGAA
GACCCCGGCA CCGAGGAGGA GGACCGCGAC AGCGTGGTGC TGTCCACCAT CCATTCCGCC
AAGGGGCTTG AGTGGAGTGC CGTCATCATC CTCGACCTCG TGGAGGACAG GTTCCCGTCG
CGCCATGCCG TGACGCGCGC CGACGACTTC GAGGAGGAGC GTCGCCTCAT GTACGTGGCC
TGCACCCGCG CCCGCGAACG GCTCATGCTC TTCGTGCCGT CCAGCCTCTA CCAGCGCGGG
GAGGGTGGCA ACCAGCCCGC CGCGCCCAGC CCCTTCGTCC GGGAGTTGCC CGCGGCACTG
TACGAGGAGT GGTACGAGAG CTATACCGGA GGTCTGCAAC GGCGTGATAC GTCGCGTCCG
GTTGCGCGTC CGGCCGTGGC ATCCACCTTC GGTTGCGCAC CGCGTCCCGA ATCGGCACCG
GTGCCCGGCG GGCCGTCGCC CGTTGCAGGG GCGGCGAAGC TGGGGTTCTG CACGCACAAG
ATCTTCGGGC GGGGCAAGAT CGTCCAGCAT CTGCCGCCCG ACAAGTACAG GGTGAACTTC
CCCGGCGTGG GGCTCAAGGT CATCCTGGGC GACTATCTGA CGCTGGAGGA TGACGCATGA
 
Protein sequence
MIEFAKELNA AQYEAVTTLD GPVLVIAGAG SGKTRTVVYR LANLLERGVP ASSILLLTFT 
RKAANEMLQR ASRLLGYGVQ GIAGGTFHAF AYSLLRQYHP ARLEGRDLTI MDGADSVAAI
QHCKDALGIA RGDKSFPKTQ TVLSLLSKSR NKELPLDEVL RREAYHLLVH ADGVSRIGEA
YAEYRAEHGL LDYDDLLFEV ERLLRERPDL LAHLRDRYRY IMVDEYQDTN LVQARLVQLL
AGEGGNVMAV GDDAQSIYAF RGANVQNILS FPQFFPGTRI IKLEENYRST QPVLDLTNAI
LAEAPQAYRK HLYTSREDGV LPQVVRPLSD LTQASIVVSR VSELLRTYPP HEIAVLFRAG
FHSYHVEVQL NKLGIRFRKY GGVRYSEAAH VKDVMAYARL VLNPLDLPAF QRVAALSRGV
GPKTTLRLYE VARQGDAAAT AHACARYPQL RADLELLDRL RKRTPAPSTL LEEVIEHYQP
RLEAAYPDDW PRRQQGLEQL VQIASAYRDL DLFISDLSLE DPGTEEEDRD SVVLSTIHSA
KGLEWSAVII LDLVEDRFPS RHAVTRADDF EEERRLMYVA CTRARERLML FVPSSLYQRG
EGGNQPAAPS PFVRELPAAL YEEWYESYTG GLQRRDTSRP VARPAVASTF GCAPRPESAP
VPGGPSPVAG AAKLGFCTHK IFGRGKIVQH LPPDKYRVNF PGVGLKVILG DYLTLEDDA