Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2547 |
Symbol | |
ID | 4664061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2975335 |
End bp | 2976012 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820796 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_967990 |
Protein GI | 120603590 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.139391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACA AACTCTTGGT CATATGGGAC GCGCTTCCCT ATATTCTCGA AGGCTCGGCC GTCACCATCG CCACGGTGCT GGGGTCGCTG GCCCTCGGGT TCTGTATGGG CGTACCCATG GCCGTGGCGC AGGTCTACGG CGGTCGCCCT GTGCGGTATC TCGTGGGGCT GTATGTCTGG TTCTTCCGGG GTATGCCCAT TCTCGTGCTG CTCTTTCTCT TCTATTTCGG TCTGTTTCAG GCTCTCGACC TCAATCTGAG CGCGTTCACG GCCTCGTGTC TCGTGCTTGG CATGGCGAGC GCCGCCTACC AGTCGCAGAT ATTCCGCGGT TCGATACTCG CCTTGCCGCA AGGGCAGCTG AAGGCGGCCC GCGCACTGGG CATGAGCGAC GGTGCGGCCA TCCGCAGCAT CGTCCTGCCG CAGGCGTTGC GTCTTTCCAT TCCGGCGTGG TCCAACGAAT ACTCCATCCT GCTCAAGGAC TCGGCACTTG CCTTCGTGCT TGGCACCCCG GAAATCATGG CCCGCACCCA CTTCGTGGCA TCGCGGACGT ATGAGCACCT GCCATTGTAC ATGACGGCGG GGGCCCTCTA CTTCATCATC ACGCTGGCGG GGCTGAAGGT GCTGCGCCAC CTCGAACGCA AGACCCGTAT CCCCGGTTAC GCCGGGTACG GCATCTGA
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Protein sequence | MLDKLLVIWD ALPYILEGSA VTIATVLGSL ALGFCMGVPM AVAQVYGGRP VRYLVGLYVW FFRGMPILVL LFLFYFGLFQ ALDLNLSAFT ASCLVLGMAS AAYQSQIFRG SILALPQGQL KAARALGMSD GAAIRSIVLP QALRLSIPAW SNEYSILLKD SALAFVLGTP EIMARTHFVA SRTYEHLPLY MTAGALYFII TLAGLKVLRH LERKTRIPGY AGYGI
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