| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2467 |
|---|
| Symbol | |
|---|
| ID | 4662531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2872797 |
|---|
| End bp | 2873984 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639820715 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_967910 |
|---|
| Protein GI | 120603510 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG GCTATTTCGG CGATTTCGGC GGCAGGTTCG TGCCTGAACT GCTGATGCCG
CCCCTGATGG AGATTGAGGC GGCCATGCGC GACATCATGC CCACGCAGGC ATTCCGCCAT
GAGCTTGACG ACCTGCTGCA CAACTTCGCA GGGCGTGAGA CCCCCCTCAC CCGGTGCGAC
ACCCTGTCGC GTGAACTCGG CTGCACCCTG TGGCTGAAAC GTGAAGACCT GCTGCACACC
GGGGCGCACA AGGTGAACAA CACCCTCGGG CAGGCGTTGC TGGCCCGAAG CATGGGCAAG
ACGCGTCTCG TGGCGGAGAC CGGCGCGGGG CAGCATGGCG TGGCCACCGC AGCGGCGGCG
GCACGGCTTG GCCTTTCGTG CATCGTCTTC ATGGGGGCGG TGGATGTGGA ACGCCAGTCC
GCCAACGTCA TGCGCATGAA GCTGCTGGGG GCGGAGGTCG TGCCCGTGGA AAGCGGCACA
CGCACCCTCA AGGACGCCAT CAACGAGGCC CTGCGCTACT GGATAGCGGA ACAGGGCAGT
ACGCACTACT GCTTCGGCAC GGCGGCGGGG CCGCACCCCT TCCCCACGCT GGTGCGCGAC
TTTCAGGCTG TCATCGGCCA CGAGACCCGG CGGCAGATGC TGGAACGCAC GGGTGCGCTA
CCCGACATGG TGGTGGCGTG CGTGGGCGGC GGTTCCAATG CCATCGGCAT GTTCCACGCC
TTCGTAGAGG ATGCCGATGT GCGCATCGTG GGTGTCGAAG CCGCAGGTAC GGGCGAACCG
GGGTGCTACA ACTCCGCGCC CATCAACCTC GGGTCGCCGG GGGTGCTGCA TGGCAACCGC
ACCATGCTGC TACAGGACGG CGACGGACAG ATACTGCCGT CGCATTCCGT CTCGGCGGGA
CTCGACTACC CCGGCGTGGG GCCGGAACAT GCCCACCTCG GTGCCACGGG GCGCGTTGTC
TACGGCATGG TCACCGACAC GCAGGCGCTA GCCGCATTCA AGGCACTCAC CCGTGCCGAG
GGCATCATCC CCGCGCTGGA ATCGTCGCAC GCGGTGGCAT GGGTGCTTGA GAACCCGCAC
CTGCTGCCGC AGGGCGGCAA TGTGGTGGTG AACCTTTCGG GACGTGGCGA CAAGGATATG
GACATCGTGC GGGAACACCT GTTCCCCGGT CTGGGAGGCA AGGCATGA
|
|---|
| Protein sequence | MKKGYFGDFG GRFVPELLMP PLMEIEAAMR DIMPTQAFRH ELDDLLHNFA GRETPLTRCD
TLSRELGCTL WLKREDLLHT GAHKVNNTLG QALLARSMGK TRLVAETGAG QHGVATAAAA
ARLGLSCIVF MGAVDVERQS ANVMRMKLLG AEVVPVESGT RTLKDAINEA LRYWIAEQGS
THYCFGTAAG PHPFPTLVRD FQAVIGHETR RQMLERTGAL PDMVVACVGG GSNAIGMFHA
FVEDADVRIV GVEAAGTGEP GCYNSAPINL GSPGVLHGNR TMLLQDGDGQ ILPSHSVSAG
LDYPGVGPEH AHLGATGRVV YGMVTDTQAL AAFKALTRAE GIIPALESSH AVAWVLENPH
LLPQGGNVVV NLSGRGDKDM DIVREHLFPG LGGKA
|
|---|
| |