Gene Dvul_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2203 
Symbol 
ID4664444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2556977 
End bp2558083 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID639820448 
ProductSerine--pyruvate transaminase 
Protein accessionYP_967646 
Protein GI120603246 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACA CCACCATCCC CATGGTTCCG GGCCCCGTCA CCCTGCACCC CGATGTGCTC 
GCAGCCCTTG CGCGCGACTA TCCTTCGGGG CAGGTCGATG AGGCCTTCAT GCCTCTGTAC
ACGCATACGG GCGTGGCCCT CGGAGCGCTC ATGGGCACGG CCAACGACGT CGTGCTGATG
ACAGGCGAGG GGATGCTCGC CCTCTGGGGG GCGCTGAAGA GCACCCTGCG CCCCGGAGAC
AAGGTGCTTT CCGTGGGTAC GGGCGTCTTC GGCGACGGCA TCGGCGACAT GGCAGCCTCC
ATCGGCTGCG AGGTGTGCAA GGTCTCCCTC CCCTATGACG AGACCATAGG GGCGACCCGC
GAGGCCCTGG CCCCCATCGA AGAGGCCATC GCCCGGTTCA GGCCGCACAT GCTCACCGCC
GTCCACTGCG AGACACCTTC GGGCACGCTC AACCCGCTTG CGGCCCTCGG CGACCTGCGC
CGTGAACTCG GGGTGCCCCT GTTCTACGTG GATGCCGTGG CCAGTGTCGG GGGGGCACCT
GTCGAAGCCG ACGCATGGGG CGTCGACCTC ATCCTCGGCG GTTCGCAGAA ATGCCTTGCC
GCCCCGCCCA GCATGAGCTT CGTCGGAGTG AGCCCCGCCG CGTGGGAACG CATCGAAGAA
GTCGGCTACC AAGGGTATGA CGCCCTGGCC CCGTTCCGCA ACGTACAGAG GCAGGGCCGC
TGCCCCTATA CCCCCTACTG GCACGGCATC GCCGCCCTGG CCGCCGGGGC CGAAGCCATC
CTGCGCGAAG GGATGGACAA CGTGTTCAGG CGTCATGCCG AGGTAGCCGC CCATTGCCGC
AAACGTATCG CTGAACTTGG CCTTTCATTG TGGACGGCAC CCGACGCGGT CAACTCGCCC
ACGGTGACGG CCGTGAACCT GCCCGAGGGC ATCTCGTGGC CGCGCTGGAA GCAGGCATTG
CTTGAGCGCG ACCTCGCCAT AACAGGCAGT TTCGGCCCCA TGGCAGGCAA GGTGTTCAGA
ATTGGGCACA TGGGCACGCA GGCGCATTTC GACCTCGTGG ACGCCGCGCT CGATGTCATC
GCCGGAACCC TGCACGACAT GCGCTGA
 
Protein sequence
MRYTTIPMVP GPVTLHPDVL AALARDYPSG QVDEAFMPLY THTGVALGAL MGTANDVVLM 
TGEGMLALWG ALKSTLRPGD KVLSVGTGVF GDGIGDMAAS IGCEVCKVSL PYDETIGATR
EALAPIEEAI ARFRPHMLTA VHCETPSGTL NPLAALGDLR RELGVPLFYV DAVASVGGAP
VEADAWGVDL ILGGSQKCLA APPSMSFVGV SPAAWERIEE VGYQGYDALA PFRNVQRQGR
CPYTPYWHGI AALAAGAEAI LREGMDNVFR RHAEVAAHCR KRIAELGLSL WTAPDAVNSP
TVTAVNLPEG ISWPRWKQAL LERDLAITGS FGPMAGKVFR IGHMGTQAHF DLVDAALDVI
AGTLHDMR