Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2080 |
Symbol | |
ID | 4663820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2418998 |
End bp | 2420740 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639820323 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_967523 |
Protein GI | 120603123 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0780382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGG CACATACATA CGGACACATG AAACGCTGGA TATACCGACC GGAGGTGGAA GGCGCACTGC CGCCATCCGC CTCTCTCGCC GAACGTCTCG GCATCTCGGA CCTGCTGCTT CGCCTGTTGC TGCGGCGCGG CCTTTCATCC GTTCAGGATA TGGACGTCTA CCTCAGCCCG CAGTTGCGCC ACCTCGCCCC GCTGGAGGAA TGGCCCGGCC TTGCTGAAGC GGCTGGCGTC ATCACGGCGG GCATCACCGC CGGGATGCCC TTTGCCGTAT GGGGCGACTA TGACGTGGAC GGGGTGACCT CCACAGCCCT TGTGCATGAC GTACTCGAGT TCCATGGCGT GGATGTGCGC CACCATCTCC CCGACCGGCG GGCCGAGGGC TACGGGCTGA ATGTGGAGTG GATAGAGAGG CTCGCTGCCG ATGGGGTGCG TCTGCTTCTC ACGGTGGACT GCGGCATATC CGATGTCGTG CCCATCTCAC GAGCCCGTGA ACTGGGCATG ACCGTGGTCG TCTCCGACCA CCACCTGCCG CCGGAGGTCT TGCCGCCCGC CCATGCCATC TGCAATCCGC GTCTCGCCTG TTGTCCGTGT CCGGCGCTGG CGGGCGTGGG GGTCGCGTTC TTCGTCATGG CGGCGGTCAA TGCCGCATTG GGAGAACGCT CCGGCAGGCG TTACGACATG CGCGAGGTGC TCGACCTTGT GGCGTTGGGG ACGCTGGCGG ATGTGGTCGA CCTCGGTGGT CAGAATCGCA TCCTCGTCAA GAACGGACTC CTGAAAATAG CCGAAGCCCG CAGGCCGGGC ATGGCGGCGC TCAAGGCAGT TGCGGGCTAC AATCCATCGG CCTCGCTGGG GGCGGGGCAG GTGGTGTTCG GGCTTGCGCC GCGCATCAAT GCGGCTGGTC GCCTTGGCGA GGCGGAGATG GCACTGCAAC TGTTGCGTGC CCGCAATCAT GGTGAGGCGG CGCAGCTTGC GCAGCGCCTT GACGCCATGA ACACCGACCG CCGTGTGGAG GAGGATCGCA TCCTCGAAGA GGCGAAACGG CAGGCCGAGT CGCAAGCCGC GTCGCGCATG GGGTTCGTGC TCCATGGCGA GGACTGGCAC CCCGGCGTCA TCGGCATCGT CGCCTCGCGC ATCGTGGAGG CCTACTACAG GCCCACACTC ATCCTGTGCA CAGAAGGGGA GACGTTGAAG GGGTCGGGGC GTTCGGTGTC GGAATTCGAC CTGCATGCAG GGCTTTCACA GTGCGCCGAC CTGTTCCTTG GCTTCGGGGG GCACAGGCAG GCCGCCGGCA TGAGCCTGAA GACCTCGGCG CTCGATGCAT TGCGGGAACG GTTCGATACC GTGGTGCGTC AGGCCCTCGG CGATACGCCG TTGACGGCAT CGCTGAAGCT GGATGGCGAC CTCGGCTTCG AGCACGCTTC GGATTTCACG GTGCTCAAGG AACTCGAGAT GTTGCAGCCT TTCGGCACAG GCAACGCCGA ACCCGTCTTC GCGTCGCCTC CGCTTCTTGT GCGCGGGTTG CGACGCTTCG GCAAGGCGCG GGAACATGTG GAACTCGAAC TCACCGACGA GTCGTGCGGG GTGACGCTGC ATGCCAAGGC ATGGCGGCAG TCCGGAGAAT TCTCCGACAG GCTGCGTGGA ACGCGGATAC GCCTCGCCTA CACGCCGCGC ATCGACAGGT ATTCCGGTGC GGCGTCCGTC GACTTGCGGA TACGAGACTG GCAACCCGCG TGA
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Protein sequence | MASAHTYGHM KRWIYRPEVE GALPPSASLA ERLGISDLLL RLLLRRGLSS VQDMDVYLSP QLRHLAPLEE WPGLAEAAGV ITAGITAGMP FAVWGDYDVD GVTSTALVHD VLEFHGVDVR HHLPDRRAEG YGLNVEWIER LAADGVRLLL TVDCGISDVV PISRARELGM TVVVSDHHLP PEVLPPAHAI CNPRLACCPC PALAGVGVAF FVMAAVNAAL GERSGRRYDM REVLDLVALG TLADVVDLGG QNRILVKNGL LKIAEARRPG MAALKAVAGY NPSASLGAGQ VVFGLAPRIN AAGRLGEAEM ALQLLRARNH GEAAQLAQRL DAMNTDRRVE EDRILEEAKR QAESQAASRM GFVLHGEDWH PGVIGIVASR IVEAYYRPTL ILCTEGETLK GSGRSVSEFD LHAGLSQCAD LFLGFGGHRQ AAGMSLKTSA LDALRERFDT VVRQALGDTP LTASLKLDGD LGFEHASDFT VLKELEMLQP FGTGNAEPVF ASPPLLVRGL RRFGKAREHV ELELTDESCG VTLHAKAWRQ SGEFSDRLRG TRIRLAYTPR IDRYSGAASV DLRIRDWQPA
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