Gene Dvul_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1794 
Symbol 
ID4662555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2096585 
End bp2097076 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content53% 
IMG OID639820035 
Producthypothetical protein 
Protein accessionYP_967238 
Protein GI120602838 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.786211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGA TTTTAAAAAA ACAAACCACA AGCAGTGCTC AGGAGGAAAC CATGTACCGT 
TCTGAAAAAA GCAAAAGGCA ACAACACGGC TTCACGCTCA TCGAAATCAT CGCTGTTCTT
GTCATTCTCG GCATCCTCGC GGCTGTCGCA GTACCAAGGT ATTTTGACCT TGCGAACCAA
GGCGAAGAAC GCGCAGCGCG CGCAGCTGTA GCTGAAGTAC AGGCTCGCGT GAACAATCTC
TTTGCGCAAC GACTCATCGC AACCAATGGA AACTGCGCAA CCGCTGTAAC AGGTATGACT
CTTGCTGCTC TGACAGATAC CGGTGCTGCT GGCGGACTCA TCGGTGGATG GACGGTGACA
GGGCTTGATG ATGCTGCACT GCAGGATGAA GGTGCCGCGA CACCTGTCGG CGTTGAACAG
GGCAATATCA ACATAGCAAG TGGCGATGTC GACCCTGCTT TGGTCGTTCG CACCCCCTCT
TGCAACAACT AA
 
Protein sequence
MARILKKQTT SSAQEETMYR SEKSKRQQHG FTLIEIIAVL VILGILAAVA VPRYFDLANQ 
GEERAARAAV AEVQARVNNL FAQRLIATNG NCATAVTGMT LAALTDTGAA GGLIGGWTVT
GLDDAALQDE GAATPVGVEQ GNINIASGDV DPALVVRTPS CNN