Gene Dvul_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1652 
Symbol 
ID4663812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1959625 
End bp1961070 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content64% 
IMG OID639819891 
Productglycine dehydrogenase subunit 2 
Protein accessionYP_967096 
Protein GI120602696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00329218 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.261135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACCG TATTCGCCAA ATCGGTGCCC GGCAGAAGTG CCGCCCTTCC CTCGGCCCCT 
TCCAGAAAGG CTGCCGACAT GCTGCCCGCC GGACTCCTGC GCTCGAAGGC GCCCCGGCTT
CCCGAGGTGA GCGAACTCGA TGTGGTTCGC CATTTCACCG GGCTTTCCAG GCTCAACTAC
AGCGTGGACG GCAATTTCTA CCCGCTCGGC TCATGCACGA TGAAGTACAA TCCCAAGTTC
ACCGAGCATG TCGCCGCGCT GCCGGGCTTC ACCCGCCTGC ATCCGCTCAT GGCACAGCTC
AAGGGGGCCG GGCAGTACAC GCAAGGCGCT CTCGAAGTCA TGTGGGAGAC GGAGCGGCTG
CTCTGCGAAA TCAACGGCAT GGCCGCCTTC ACCCTGCACC CCATGGCCGG GGCGCACGGC
GAACTCACGG GCGTCATGCT CATTGCCGCC TACCATAAGG ACAAGGGCAA CCGTAAGACC
AAGATCATCT GCCCCGACTC GGCACATGGC ACCAACCCCG CCTCCGCCGC ACTCGCCGGG
TACGAGGTGG TGAACATCGA ATCGAAGGAC GGCCTCGTCG ACCCCGACGC GCTCGAAGCC
GTGCTCGACG ACGAAGTGGC AGCCCTCATG ATGACATGCC CCAACACGCT GGGCCTGTTC
GAGAAGCACC TGCCGCGCAT CGTCGAGAAG CTGCGCGCCG TCGATGCCCT GCTCTATTAC
GACGGGGCGA ACCTCAACGC CATCATGGGC AAGATGCGCG TAGGCGATGT GGGCTTCGAC
GTGGTGCACC TCAACCTGCA CAAGACCTTC GGCACACCGC ATGGCGGCGG CGGCCCCGGG
TCGGGCCCCG TGGGCGTGAG TGCACGCCTT GAACCCTACC TGCCCATCTC GCGGGTCGAG
AAGGAACGCG ACGGCCACTT CTTCCTCAAC TACGACTACC CCAAGTCCAT CGGGTATGTG
GCCCCCTTCT ACGGCAACTT CGGTGTGCTG CTGAAGGCGT ATGCCTACAT CCTGCGTCTC
GGGGCAGAAG GCCTTACACG CGCCTCCGAA TTCGCGGTGC TCAACGCCAA CTACATGCGC
TGCAAGTTGC GCGGGGTGCT CGACATCCCC CACGACCGCA CATGCATGCA TGAATTCGTC
GCCTCCGCCT GCAATACGGC CGAATGCGGC GTACGTGCGC TGGACATCGC CAAGGCGTTG
CTCGACAAGG GCTACCATGC CCCGACCATC TACTTTCCGC TCATCGTCAA GGAATGCCTC
ATGTTCGAGC CTACCGAGAC GGAAAGCAGG GAGACTCTCG ACGCCTTCAT GGACGACCTT
GCCTCCATCG TCGAACAGGG GCGGCAGACC CCGGACGCGT TGCACGACGC GCCGCTGCAC
ACTCCCGTGC GACGCCTTGA TGAGACGGCT GCAGCCCGCA ACATGGTGCT GACCGATGAC
CTATGA
 
Protein sequence
MKTVFAKSVP GRSAALPSAP SRKAADMLPA GLLRSKAPRL PEVSELDVVR HFTGLSRLNY 
SVDGNFYPLG SCTMKYNPKF TEHVAALPGF TRLHPLMAQL KGAGQYTQGA LEVMWETERL
LCEINGMAAF TLHPMAGAHG ELTGVMLIAA YHKDKGNRKT KIICPDSAHG TNPASAALAG
YEVVNIESKD GLVDPDALEA VLDDEVAALM MTCPNTLGLF EKHLPRIVEK LRAVDALLYY
DGANLNAIMG KMRVGDVGFD VVHLNLHKTF GTPHGGGGPG SGPVGVSARL EPYLPISRVE
KERDGHFFLN YDYPKSIGYV APFYGNFGVL LKAYAYILRL GAEGLTRASE FAVLNANYMR
CKLRGVLDIP HDRTCMHEFV ASACNTAECG VRALDIAKAL LDKGYHAPTI YFPLIVKECL
MFEPTETESR ETLDAFMDDL ASIVEQGRQT PDALHDAPLH TPVRRLDETA AARNMVLTDD
L