Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1484 |
Symbol | |
ID | 4662735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1776368 |
End bp | 1779127 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639819718 |
Product | hypothetical protein |
Protein accession | YP_966929 |
Protein GI | 120602529 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0431579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAGGG GAGTCTCACC GGCAGATGTT GTGCAGGCCC TGTTGGACGA CCCGGTTTTC CGCTTCGAGG ATGCGGGCAA ATACCTGCGA AAGGGCCAGT GCCCGGGGTG CGGCAAGCGC ACTCTCTATG TGCTGAAGGA CAAGCCGTGG GTCATCCGGT GCGAACGCCT CAACAAGTGC GGGCATGAGG TGACGGCGCG CGAGGCGCTG CCCGATGTCT TCGCCGACTT CGCCCGACGC TACCCCCCTA CCGAAGAGAA CAGGCAGGCC ACCGCAGACG CCTACCTCGC CCTCGACCGA GGCTTCGACT TATCCAGGAT ACAGGGGTGG TATGAACAGG CGGCATGGCC CGTACCGGGC ACGACAGACC ACATCCCCAC CGTGCGCTTC TACCTGGACG AGGGGCGCAC CCGCTGGTGG GAACGCCTGA TAGACCGCAC CAAGAAGGAC GGCCAGAAGG CCAACTTCGG CGGACGCAAG AAGGACGACG GTAGCCTCTT CTCCGGTGAC GCATGGACGC CCCCAGGCAT GGCCCTTGAA GACGGCGACC GCTGCTTCAT CGTGGAGGGC ATCTTCCACG CCATCGCCCT GCACCATGCG GGCTACAAGG CCATAGCCGC CTTCTCGTGC AGCCATTTCC CGTCCACGTT CATAGAGGCT AACGCCAAGC GGCGCATACG GTGGGTGGTG GCACTCGACT CCGACAAGGC CGGGCGCGAG TGGGCGCGCA AGCACCATGC CCGGCTCAAG CAGATGGGTG AGCTAGCCTC TGTCTGCCTG TTGCCCGACG GCAAGGACTG GGACGACCTA TGGCGCGCCG GGCGCATCGA TACCCGCTTC ATCACCGACA GGCTGTACTA CGGACGCCTC TTCATGGCGG AGACGGTGCA GGAGAAGGCC TACGTCTATT ACCGCCGCCA TCGGCGCGGG CTGTTCCTGC TCGACTTCGA GAACGCCATT TACAGCATCA CGCTGGGCAA GGACTTCGAC AAGGCGCTGG GCGAGGCCGC CGTACAGTGG TCTGAGCAGG AACTGGAGGC CAAGCGCACC GGTGCCGTGC CAGCCACCCC GCCCACGGGC AAGCCCAACG ACGAGGCGCA GAACCCGATG GACGCCTTGC TCGCCTCACC CATCGGGCGC GAGATCTTCG CCATGCACTG CTCCATCGAC CAGGTGTCGA ACGTGCTCCC GCGCTTTCTG TACATGGAGC GCGACGAGAT CATGGACGAG CAGCGCTATG TCTTCAGCGT GGCCTATGCC AACGGCCAGC CCGACGACAT CATCTCGCTG GAGGGCACAT CCATCACCAG CCCGGAGGCC TTCCACAAGG CCATGCTCAA CCGTACCCGG GGCGGCACCT TCGATGGCGA CGCCAAGCAG CTCAAGATAC TCCGCGACCG CTGGCTCAAC AGCCGCATGC TCACCGTCAC GGCCCTGCCT TTCGTGGGCT ATGACAACGA ATCGGGCGCG TGGATAGGGC AGCAACACGC ATGGCATCGA GGCCGCCGCA TCCCCCTCAA CGAGCACGGC TACTTCAACA TCGGTCGGCG TGGCATCAAG TCGTCCCTCA AGGGGGTGAC CATCAGTACC GATGGCAAGT TCTCCCCGGC TTGGCTCAAG AACTACGCCA CGGCCTTCCA CTGGCAGGGC ATGGCCACGC TGGCCTTCTG GCTTGGGTCG CTCTTCGTCC AGCAGATACG GGCCGTACAC AAGACCTTTC CCTTTCTGGA ACTGACGGGC GAACCGGGGG CGGGCAAGTC CACCATCCTT GAGTTCCTCT GGAAGTGCGT GGGCCGCGAC GACTACGAAG GCTTCGACCT GCTCAAGTCC ACCCCTGCGG GCCGCCGCCG TGCGTTCTCG CAGGTGAGCA ACCTGCCCGT GGTCATCATC GAATCAGACC GTGACAACGG CGAGAAGGAC ACAAAGCTCA AGCAGTTCGG CTTTGACGAG GTGAAGACCT TCTACAACGG GCGCAGCACC GGCACACTGG GCGTGGCCAA GCGCTCCAAC GACGTGGACG AAAGCCCGTT TCAGGCCAGC CTTCTCATAA GCCAGAACGC AGAGGTTGAC GGTTCCGAGG CGTTGCTCCA GCGCATCGTG CATTGCCACG CCGACAAGAA GCACCACAAG CCGGGCACGC GCGACGTGGC CCGCTGGTTC GAGAGGCAGA CAAGCTCTGA CGTTGGCGGT TTTCTCGGTG CCGCCCTCGC ACGAGAGCGC GACATTCTCG AAACCTACCA GACGGCATTC GAACGCATCG AGGCGCGCTA TTCCGACAGT TCCCTCAAGA ACGAGCGCAT CATCAAGAAC CATGCGCAGG TGGCGGCCTG TGGCCATGCG CTTGGGGTGA TCTTTCCCAC CATGACAGAC CACCTGAAAG ACGGCCTGAC AGAATACCTG CTGCTGCGGG CCAAGGCGCG AGAGCAGCGC CTAGCCGCAG ACCATCCGCT GGTGGAGCAG TTCTGGGACA CCTACGACTA TCTGTCCATC CAACTGACCA AGACCACCTC GCGACTGGAT CCGCTGAACC ACGACCGGCG CGACGGCGTC ATTGCCGTGA ACTTCAACCA TTTTCTGGAG GCGTGTCGCA ACTGCGGCCA GCCCACTCCC GACATCGGCG CGCTGAAGAA GTTGTTACCC GCCGGTAATG CCCGGCGCTT CATTGCCGCC AACCGCAGCG TGCATTCGCA GCACGAGAAG AAGACCGTGA AGTGCTGGCT GTTCCACGCC CCCAAACTGC CCACCATGGA GGAAGATTGA
|
Protein sequence | MSRGVSPADV VQALLDDPVF RFEDAGKYLR KGQCPGCGKR TLYVLKDKPW VIRCERLNKC GHEVTAREAL PDVFADFARR YPPTEENRQA TADAYLALDR GFDLSRIQGW YEQAAWPVPG TTDHIPTVRF YLDEGRTRWW ERLIDRTKKD GQKANFGGRK KDDGSLFSGD AWTPPGMALE DGDRCFIVEG IFHAIALHHA GYKAIAAFSC SHFPSTFIEA NAKRRIRWVV ALDSDKAGRE WARKHHARLK QMGELASVCL LPDGKDWDDL WRAGRIDTRF ITDRLYYGRL FMAETVQEKA YVYYRRHRRG LFLLDFENAI YSITLGKDFD KALGEAAVQW SEQELEAKRT GAVPATPPTG KPNDEAQNPM DALLASPIGR EIFAMHCSID QVSNVLPRFL YMERDEIMDE QRYVFSVAYA NGQPDDIISL EGTSITSPEA FHKAMLNRTR GGTFDGDAKQ LKILRDRWLN SRMLTVTALP FVGYDNESGA WIGQQHAWHR GRRIPLNEHG YFNIGRRGIK SSLKGVTIST DGKFSPAWLK NYATAFHWQG MATLAFWLGS LFVQQIRAVH KTFPFLELTG EPGAGKSTIL EFLWKCVGRD DYEGFDLLKS TPAGRRRAFS QVSNLPVVII ESDRDNGEKD TKLKQFGFDE VKTFYNGRST GTLGVAKRSN DVDESPFQAS LLISQNAEVD GSEALLQRIV HCHADKKHHK PGTRDVARWF ERQTSSDVGG FLGAALARER DILETYQTAF ERIEARYSDS SLKNERIIKN HAQVAACGHA LGVIFPTMTD HLKDGLTEYL LLRAKAREQR LAADHPLVEQ FWDTYDYLSI QLTKTTSRLD PLNHDRRDGV IAVNFNHFLE ACRNCGQPTP DIGALKKLLP AGNARRFIAA NRSVHSQHEK KTVKCWLFHA PKLPTMEED
|
| |